Dac_g28933

Description : not classified & original description: none

Gene families : OG0003321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003321_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g28933
Cluster	HCCA: Cluster_126

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00086p00132870	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
AT3G47910	No alias	Ubiquitin carboxyl-terminal hydrolase-related protein	0.03	OrthoFinder output from all 47 species
Aspi01Gene09608.t1	Aspi01Gene09608	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01008079001	No alias	No description available	0.04	OrthoFinder output from all 47 species
LOC_Os03g06950.1	LOC_Os03g06950	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Len_g49533	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_46922g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Msp_g13542	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Ppi_g13760	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g02198	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e039017_P003	Zm00001e039017	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004843	cysteine-type deubiquitinase activity	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	deubiquitinase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	IEP	HCCA
BP	GO:0001510	RNA methylation	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006284	base-excision repair	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
MF	GO:0008047	enzyme activator activity	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0016197	endosomal transport	IEP	HCCA
BP	GO:0016482	cytosolic transport	IEP	HCCA
BP	GO:0016556	mRNA modification	IEP	HCCA
MF	GO:0019208	phosphatase regulator activity	IEP	HCCA
MF	GO:0019211	phosphatase activator activity	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
CC	GO:0030906	retromer, cargo-selective complex	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0042147	retrograde transport, endosome to Golgi	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
BP	GO:0043484	regulation of RNA splicing	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0048024	regulation of mRNA splicing, via spliceosome	IEP	HCCA
BP	GO:0050684	regulation of mRNA processing	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0080009	mRNA methylation	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1903311	regulation of mRNA metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006865	DUF629	364	923
IPR006866	DUF627_N	98	204
IPR001394	Peptidase_C19_UCH	1433	1754

External Links

No external refs found!

Dac_g28933

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation