Dac_g20883 (WRKY55, ATWRKY55)

Aliases : WRKY55, ATWRKY55

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g20883

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00015p00228580	WRKY53,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AMTR_s00077p00103880	WRKY55,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AT1G66550	WRKY67, ATWRKY67	WRKY DNA-binding protein 67	0.02	OrthoFinder output from all 47 species
AT1G80590	WRKY66, ATWRKY66	WRKY DNA-binding protein 66	0.02	OrthoFinder output from all 47 species
AT2G30250	ATWRKY25, WRKY25	WRKY DNA-binding protein 25	0.02	OrthoFinder output from all 47 species
AT3G01970	ATWRKY45, WRKY45	WRKY DNA-binding protein 45	0.03	OrthoFinder output from all 47 species
AT5G46350	WRKY8, ATWRKY8	WRKY DNA-binding protein 8	0.02	OrthoFinder output from all 47 species
Aev_g03082	WRKY48, ATWRKY48	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g04676	WRKY4	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g05188	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g08492	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene27646.t1	Aspi01Gene27646	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene52709.t1	Aspi01Gene52709	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene52729.t1	WRKY28,...	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0442.g070360	WRKY3	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.01G101400.1	WRKY4, Ceric.01G101400	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.03G038600.1	WRKY33,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.13G048400.1	WRKY3, Ceric.13G048400	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.35G059800.1	WRKY6, ATWRKY6,...	WRKY-type transcription factor & original description:...	0.08	OrthoFinder output from all 47 species
Dcu_g42615	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01022245001	ATWRKY51, WRKY51	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01030174001	WRKY54, ATWRKY54	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01033194001	ATWRKY51, WRKY51	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
LOC_Os01g18584.1	AtWRKY47,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os03g45450.1	ATWRKY71,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
LOC_Os08g29660.1	WRKY53,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Len_g07502	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g09174	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_10432362g0010	ATWRKY50, WRKY50	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_179641g0010	ATWRKY71, WRKY71	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
MA_54954g0010	ATWRKY50, WRKY50	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
MA_892467g0010	WRKY72, ATWRKY72	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
MA_93790g0010	ATWRKY71, WRKY71	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Nbi_g36467	WRKY55, ATWRKY55	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g38791	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g60782	No alias	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pp3c2_32150V3.1	WRKY48,...	WRKY DNA-binding protein 4	0.02	OrthoFinder output from all 47 species
Sam_g50657	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g095630.3.1	AtWRKY41,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc02g032950.3.1	WRKY6, ATWRKY6,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc03g007380.2.1	AtWRKY41,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Solyc03g113120.4.1	WRKY72,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc04g051690.4.1	ATWRKY51,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Solyc05g050340.4.1	WRKY55,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc06g048870.3.1	WRKY55,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc06g066370.4.1	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.02	OrthoFinder output from all 47 species
Solyc12g056745.1.1	ATWRKY51,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Tin_g14530	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g19874	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g32456	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e005219_P001	WRKY1, ZAP1,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e011098_P001	WRKY75,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e021431_P001	WRKY75,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e034150_P001	ATWRKY40,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e035859_P001	WRKY46,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e040369_P001	WRKY6, ATWRKY6,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	244	304

External Links

No external refs found!

Dac_g20883 (WRKY55, ATWRKY55)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation