Dac_g13375 (WRKY4)

Aliases : WRKY4

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g13375
Cluster	HCCA: Cluster_82

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00229970	WRKY48,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AMTR_s00065p00201230	ATWRKY40,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AMTR_s00078p00145410	ATWRKY50,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AT1G80840	ATWRKY40, WRKY40	WRKY DNA-binding protein 40	0.04	OrthoFinder output from all 47 species
AT2G47260	WRKY23, ATWRKY23	WRKY DNA-binding protein 23	0.02	OrthoFinder output from all 47 species
AT5G13080	WRKY75, ATWRKY75	WRKY DNA-binding protein 75	0.02	OrthoFinder output from all 47 species
AT5G49520	WRKY48, ATWRKY48	WRKY DNA-binding protein 48	0.02	OrthoFinder output from all 47 species
Adi_g021148	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g075760	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g109927	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g112197	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g114020	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g20332	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g49189	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g15724	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g25912	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g26276	WRKY56, ATWRKY56	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene15984.t1	ATWRKY71,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene49407.t1	ATWRKY71,...	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g61706	WRKY4	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.04G004800.1	ATWRKY71,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.08G068500.1	ATWRKY71,...	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.09G081700.1	ATWRKY50,...	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.13G048400.1	WRKY3, Ceric.13G048400	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.27G017800.1	WRKY42,...	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.28G003100.1	WRKY31,...	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.29G026500.1	Ceric.29G026500	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ehy_g27429	WRKY72, ATWRKY72	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01024624001	WRKY33, ATWRKY33	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01033194001	ATWRKY51, WRKY51	RNA biosynthesis.transcriptional activation.WRKY...	0.07	OrthoFinder output from all 47 species
LOC_Os02g08440.1	ATWRKY40,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os03g21710.1	ATWRKY70,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os03g55080.1	ATWRKY57,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os05g09020.1	ATWRKY50,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os05g49100.1	ATWRKY71,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os09g25060.1	ATWRKY40,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
LOC_Os09g25070.1	ATWRKY40,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Len_g40222	WRKY55, ATWRKY55	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_10434976g0010	ATWRKY57, WRKY57	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
MA_2290g0010	ATWRKY30, WRKY30	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_310991g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_451720g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_49848g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_53351g0010	WRKY2, ATWRKY2	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Nbi_g08715	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g14900	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g36467	WRKY55, ATWRKY55	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g29855	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003023	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: CDS=1-1497	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006969	WRKY6, ATWRKY6	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Spa_g11950	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g15879	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g38478	WRKY4	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g32456	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Zm00001e015980_P001	WRKY9, ATWRKY9,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e019448_P001	WRKY38,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e025937_P001	WRKY72,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e027301_P001	WRKY54,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Zm00001e027804_P001	WRKY9, ATWRKY9,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e032444_P001	ATWRKY71,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e036514_P001	WRKY72,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e037631_P001	ATWRKY40,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016853	isomerase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	307	361
IPR003657	WRKY_dom	495	551

External Links

No external refs found!

Dac_g13375 (WRKY4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation