Aliases : UPL1
Description : E3 ubiquitin ligase *(UPL1) & original description: none
Gene families : OG0001042 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001042_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00033p00211330 | UPL1,... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
AT1G55860 | UPL1 | ubiquitin-protein ligase 1 | 0.03 | OrthoFinder output from all 47 species | |
AT1G70320 | UPL2 | ubiquitin-protein ligase 2 | 0.04 | OrthoFinder output from all 47 species | |
Adi_g052147 | UPL2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g077941 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g16628 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g06583 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ala_g06863 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g14108 | UPL1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g27017 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g26360 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g02070 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g04957 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g21858 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g05120 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01009206001 | UPL2 | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01014698001 | UPL1 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Gb_26785 | UPL1 | monomeric E3 ubiquitin ligase (HECT) | 0.03 | OrthoFinder output from all 47 species | |
MA_20049g0010 | UPL1 | monomeric E3 ubiquitin ligase (HECT) | 0.03 | OrthoFinder output from all 47 species | |
Msp_g19139 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g41520 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g57729 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g02429 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Solyc04g076620.4.1 | UPL1, Solyc04g076620 | monomeric E3 ubiquitin ligase (HECT) | 0.02 | OrthoFinder output from all 47 species | |
Tin_g01306 | UPL1 | E3 ubiquiTin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g21189 | UPL1 | E3 ubiquiTin ligase *(UPL1) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e017836_P002 | UPL1, Zm00001e017836 | monomeric E3 ubiquitin ligase (HECT) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e039654_P001 | UPL1, Zm00001e039654 | monomeric E3 ubiquitin ligase (HECT) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0006473 | protein acetylation | IEP | HCCA |
BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
BP | GO:0016573 | histone acetylation | IEP | HCCA |
MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
BP | GO:0043543 | protein acylation | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000569 | HECT_dom | 3384 | 3694 |
IPR010309 | E3_Ub_ligase_DUF908 | 84 | 206 |
IPR010309 | E3_Ub_ligase_DUF908 | 216 | 361 |
IPR010314 | E3_Ub_ligase_DUF913 | 424 | 772 |
IPR015940 | UBA | 1272 | 1309 |
IPR025527 | HUWE1/Rev1_UBM | 2666 | 2697 |
IPR025527 | HUWE1/Rev1_UBM | 2591 | 2614 |
IPR025527 | HUWE1/Rev1_UBM | 2626 | 2657 |
No external refs found! |