Aliases : GLR3.3, ATGLR3.3
Description : ligand-gated cation channel *(GLR) & original description: none
Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Dac_g11124 | |
Cluster | HCCA: Cluster_1 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Als_g39737 | GLUR3, GLR3.4, ATGLR3.4 | ligand-gated cation channel *(GLR) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g25107 | GLR3.6, ATGLR3.6 | ligand-gated cation channel *(GLR) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ceric.1Z216900.1 | GLR3.6,... | ligand-gated cation channel *(GLR) & original... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.23G025200.1 | GLR3.3,... | not classified & original description: pacid=50610224... | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g14399 | GLR3.3, ATGLR3.3 | ligand-gated cation channel *(GLR) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g30433 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Gb_06329 | ATGLR3.5, GLR6, GLR3.5 | ligand-gated cation channel (GLR) | 0.03 | OrthoFinder output from all 47 species | |
Len_g08825 | GLR3.3, ATGLR3.3 | ligand-gated cation channel *(GLR) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
MA_10429302g0010 | GLR2.5, ATGLR2.5 | ligand-gated cation channel (GLR) | 0.02 | OrthoFinder output from all 47 species | |
MA_160730g0010 | GLR3.3, ATGLR3.3 | ligand-gated cation channel (GLR) | 0.02 | OrthoFinder output from all 47 species | |
Msp_g37768 | ATGLR3.1, GLR2,... | ligand-gated cation channel *(GLR) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g04400 | GLR3.3, ATGLR3.3 | ligand-gated cation channel *(GLR) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g07247 | GLR3.3, ATGLR3.3 | ligand-gated cation channel *(GLR) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g33889 | GLR3.3, ATGLR3.3 | ligand-gated cation channel *(GLR) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g15300 | GLR3.3, ATGLR3.3 | ligand-gated cation channel *(GLR) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g32902 | ATGLR3.5, GLR6, GLR3.5 | ligand-gated cation channel *(GLR) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc08g006500.4.1 | GLR2.8,... | ligand-gated cation channel (GLR) | 0.02 | OrthoFinder output from all 47 species | |
Tin_g28532 | GLR3.3, ATGLR3.3 | ligand-gated cation channel *(GLR) & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0015276 | ligand-gated monoatomic ion channel activity | IEA | Interproscan |
CC | GO:0016020 | membrane | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
BP | GO:0000272 | polysaccharide catabolic process | IEP | HCCA |
BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
BP | GO:0006576 | biogenic amine metabolic process | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0007165 | signal transduction | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009308 | amine metabolic process | IEP | HCCA |
BP | GO:0009309 | amine biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
MF | GO:0016160 | amylase activity | IEP | HCCA |
MF | GO:0016161 | beta-amylase activity | IEP | HCCA |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
MF | GO:0030410 | nicotianamine synthase activity | IEP | HCCA |
BP | GO:0030417 | nicotianamine metabolic process | IEP | HCCA |
BP | GO:0030418 | nicotianamine biosynthetic process | IEP | HCCA |
MF | GO:0031267 | small GTPase binding | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
BP | GO:0042401 | biogenic amine biosynthetic process | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
MF | GO:0051020 | GTPase binding | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0072350 | tricarboxylic acid metabolic process | IEP | HCCA |
BP | GO:0072351 | tricarboxylic acid biosynthetic process | IEP | HCCA |
No external refs found! |