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  5. Dac_g10119

Dac_g10119


Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0004402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g10119

Target Alias Description ECC score Gene Family Method Actions
Ceric.14G008300.1 Ceric.14G008300 EC_4.1 carbon-carbon lyase & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021493.35 No alias Amino acid metabolism.biosynthesis.aspartate... 0.02 OrthoFinder output from all 47 species
Ehy_g09748 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e020909_P002 Zm00001e020909 diaminopimelate decarboxylase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR022644 De-COase2_N 106 350
IPR022643 De-COase2_C 351 441
No external refs found!