Dac_g09678

Description : E3 ubiquitin ligase *(SAUL) & original description: none

Gene families : OG0000782 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000782_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g09678
Cluster	HCCA: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
Aop_g00798	No alias	E3 ubiquitin ligase *(SAUL) & original description: none	0.05	OrthoFinder output from all 47 species
Azfi_s0021.g015762	No alias	E3 ubiquitin ligase *(SAUL) & original description: CDS=1-3144	0.03	OrthoFinder output from all 47 species
Dcu_g12042	PUB44, SAUL1, ATPUB44	E3 ubiquitin ligase *(SAUL) & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os01g72000.1	LOC_Os01g72000	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species
Mp1g26780.1	PUB44, SAUL1, ATPUB44	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Ppi_g32045	PUB44, SAUL1, ATPUB44	E3 ubiquitin ligase *(SAUL) & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g27901	No alias	E3 ubiquitin ligase *(SAUL) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g096200.4.1	Solyc01g096200	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Solyc09g083060.4.1	Solyc09g083060	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Spa_g41416	No alias	E3 ubiquitin ligase *(SAUL) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g12195	No alias	E3 ubiquiTin ligase *(SAUL) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016160	amylase activity	IEP	HCCA
MF	GO:0016161	beta-amylase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
MF	GO:0042393	histone binding	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR045766	MCAfunc	34	142
IPR000225	Armadillo	534	569
IPR000225	Armadillo	571	613
IPR003613	Ubox_domain	264	330

External Links

No external refs found!

Dac_g09678

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation