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  5. Dac_g06297

Dac_g06297


Description : GRAS-type transcription factor & original description: none


Gene families : OG0000181 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g06297
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AT3G46600 No alias GRAS family transcription factor 0.04 OrthoFinder output from all 47 species
Ala_g07653 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26224 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g29384 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g60766 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g14981 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29920 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38920 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05451.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05452.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23275.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene24617.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene32519.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32542.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G080800.1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Dac_g10278 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g14499 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18741 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42821 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g45854 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15158 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g16289 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016522001 ATGRAS2, SCL14, GRAS2 RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
GSVIVT01034155001 No alias RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
Gb_29764 No alias transcription factor (GRAS) 0.05 OrthoFinder output from all 47 species
LOC_Os03g40080.1 LOC_Os03g40080 transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
LOC_Os11g47870.1 LOC_Os11g47870 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Len_g08381 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g47996 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08951 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09779 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18536 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35888 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g65671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g21005 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62353 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62859 No alias GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Smo80549 ATGRAS2, SCL14, GRAS2 RNA biosynthesis.transcriptional activation.GRAS... 0.04 OrthoFinder output from all 47 species
Solyc01g100200.3.1 ATGRAS2, SCL14,... transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
Spa_g10374 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g16511 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g21454 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52612 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g53562 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56681 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g57105 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g46262 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e020937_P001 Zm00001e020937 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Zm00001e020943_P001 Zm00001e020943 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 3 115
No external refs found!