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  5. Dac_g04344

Dac_g04344


Description : histone *(H3) & original description: none


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g04344
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT1G09200 No alias Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G10390 No alias Histone superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G65360 No alias Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g12785 No alias histone H3 variant *(CENH3) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24303 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26587 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36382 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33085 No alias histone *(H3) & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0109.g045300 No alias histone H3 variant *(CENH3) & original description: CDS=340-828 0.03 OrthoFinder output from all 47 species
Dac_g01991 No alias histone H3 variant *(CENH3) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026582001 No alias Histone H3.2 OS=Pisum sativum 0.03 OrthoFinder output from all 47 species
Len_g04468 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05015 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g06032 No alias histone *(H3) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g36081 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g25724 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007202 No alias not classified & original description: CDS=224-661 0.02 OrthoFinder output from all 47 species
Sam_g06113 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g080600.4.1 Solyc01g080600 histone (H3) 0.03 OrthoFinder output from all 47 species
Solyc01g086820.4.1 Solyc01g086820 histone (H3) 0.03 OrthoFinder output from all 47 species
Spa_g33705 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52114 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03087 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04242 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05318 No alias histone *(H3) & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g09717 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g25835 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g45756 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e018263_P001 Zm00001e018263 histone (H3) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 2 126
No external refs found!