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  5. Dac_g04165

Dac_g04165 (AtAIRP1, AIRP1)


Aliases : AtAIRP1, AIRP1

Description : E3 ubiquitin ligase *(AIRP1) & original description: none


Gene families : OG0000892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000892_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g04165

Target Alias Description ECC score Gene Family Method Actions
AT2G42060 No alias Cysteine/Histidine-rich C1 domain family protein 0.02 OrthoFinder output from all 47 species
Aev_g19331 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.18G064000.1 Ceric.18G064000 E3 ubiquitin ligase *(AIRP1) & original description:... 0.04 OrthoFinder output from all 47 species
LOC_Os08g31250.1 LOC_Os08g31250 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g31980.1 LOC_Os09g31980 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g43990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g073780.2.1 Solyc01g073780 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc01g073860.3.1 Solyc01g073860 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g014370.1.1 Solyc08g014370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 301 343
IPR004146 DC1 105 151
IPR004146 DC1 161 208
IPR004146 DC1 3 42
No external refs found!