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  5. Dac_g02192

Dac_g02192


Description : AHL clade-B transcription factor & original description: none


Gene families : OG0000263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g02192

Target Alias Description ECC score Gene Family Method Actions
Als_g07016 ATAHL1, AHL1 AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G016000.1 Ceric.34G016000 AHL clade-B transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.38G025900.1 Ceric.38G025900 AHL clade-B transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ppi_g05787 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g007530.4.1 ATAHL1, AHL1,... AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc08g008030.3.1 Solyc08g008030 AT-hook motif nuclear-localized protein 5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc12g094710.2.1 Solyc12g094710 AT-hook motif nuclear-localized protein 10... 0.03 OrthoFinder output from all 47 species
Spa_g00865 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e010074_P004 Zm00001e010074 AT-hook motif nuclear-localized protein 10... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0000491 small nucleolar ribonucleoprotein complex assembly IEP HCCA
BP GO:0000492 box C/D snoRNP assembly IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR005175 PPC_dom 143 256
No external refs found!