Aliases : CLPP3, NCLPP3
Description : proteolytic core component *(ClpP1/3-6) of chloroplast Clp-type protease complex & original description: none
Gene families : OG0000552 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000552_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00045p00165520 | NCLPP1, CLPP5,... | Protein degradation.peptidase families.serine-type... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00048p00200340 | NCLPP4, CLPP4,... | ATP-dependent Clp protease proteolytic subunit 4,... | 0.03 | OrthoFinder output from all 47 species | |
AT1G02560 | NCLPP1, CLPP5, NCLPP5 | nuclear encoded CLP protease 5 | 0.02 | OrthoFinder output from all 47 species | |
AT5G45390 | NCLPP4, CLPP4 | CLP protease P4 | 0.02 | OrthoFinder output from all 47 species | |
Aev_g00900 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Als_g02394 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Als_g27637 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.01G078500.1 | NCLPP1, CLPP5,... | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Cre12.g500950 | NCLPP4, CLPP4 | Protein degradation.peptidase families.serine-type... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g12975 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g00970 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g22353 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01028130001 | NCLPP1, CLPP5, NCLPP5 | Protein degradation.peptidase families.serine-type... | 0.06 | OrthoFinder output from all 47 species | |
Gb_02667 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component ClpP1/3-6 of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g32350.1 | CLPP3, NCLPP3,... | proteolytic core component ClpP1/3-6 of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g30598 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Mp3g07790.1 | CLPP3, NCLPP3 | proteolytic core component ClpP1/3-6 of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g00395 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g09218 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.07 | OrthoFinder output from all 47 species | |
Nbi_g12472 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
Pp3c5_27640V3.1 | NCLPP4, CLPP4,... | CLP protease P4 | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g10398 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g32919 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g07488 | No alias | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g100520.3.1 | NCLPP1, CLPP5,... | proteolytic core component ClpP1/3-6 of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g091280.3.1 | CLPP3, NCLPP3,... | proteolytic core component ClpP1/3-6 of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e015198_P001 | CLPP2, NCLPP7,... | ATP-dependent Clp protease proteolytic subunit 2,... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e026353_P001 | CLPP3, NCLPP3,... | proteolytic core component ClpP1/3-6 of chloroplast... | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
BP | GO:0006457 | protein folding | IEP | HCCA |
BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
MF | GO:0015297 | antiporter activity | IEP | HCCA |
BP | GO:0016226 | iron-sulfur cluster assembly | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | HCCA |
MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | HCCA |
MF | GO:0044183 | protein folding chaperone | IEP | HCCA |
MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
MF | GO:0051499 | D-aminoacyl-tRNA deacylase activity | IEP | HCCA |
MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR023562 | ClpP/TepA | 68 | 241 |
No external refs found! |