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  5. Dac_g00043

Dac_g00043


Description : component *(eS27) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001813 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001813_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g00043

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00194290 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
AT3G61110 ARS27A, RS27A ribosomal protein S27 0.04 OrthoFinder output from all 47 species
Azfi_s0004.g008655 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Cba_g35394 No alias component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ceric.26G067400.1 ARS27A, RS27A,... component *(eS27) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001299.2 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Cre12.g529400 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
Dcu_g35625 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
GSVIVT01001113001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
MA_54625g0010 ARS27A, RS27A component RPS27 of SSU proteome 0.05 OrthoFinder output from all 47 species
Mp5g09510.1 No alias component RPS27 of SSU proteome 0.06 OrthoFinder output from all 47 species
Pir_g27799 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Pp3c1_15840V3.1 Pp3c1_15840 ribosomal protein S27 0.04 OrthoFinder output from all 47 species
Pp3c22_18310V3.1 ARS27A, RS27A,... ribosomal protein S27 0.04 OrthoFinder output from all 47 species
Pp3c2_20540V3.1 ARS27A, RS27A,... ribosomal protein S27 0.03 OrthoFinder output from all 47 species
Solyc06g068710.3.1 ARS27A, RS27A,... component RPS27 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003714 transcription corepressor activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000592 Ribosomal_S27 82 125
No external refs found!