1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre16.g673617

Cre16.g673617 (APG3)


Aliases : APG3

Description : Protein biosynthesis.organelle translation machineries.translation termination.PrfA-type peptide chain release factor


Gene families : OG0002151 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002151_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g673617

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00193080 APG3,... Protein biosynthesis.organelle translation... 0.06 OrthoFinder output from all 47 species
AT3G62910 APG3 Peptide chain release factor 1 0.07 OrthoFinder output from all 47 species
Adi_g050329 APG3 translation peptide chain release factor *(PrfA) &... 0.02 OrthoFinder output from all 47 species
Ala_g02141 APG3 translation peptide chain release factor *(PrfA) &... 0.02 OrthoFinder output from all 47 species
Als_g00810 APG3 translation peptide chain release factor *(PrfA) &... 0.03 OrthoFinder output from all 47 species
Aob_g03139 APG3 translation peptide chain release factor *(PrfA) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene04479.t1 APG3, Aspi01Gene04479 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene04480.t1 APG3, Aspi01Gene04480 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G071000.1 APG3, Ceric.06G071000 translation peptide chain release factor *(PrfA) &... 0.04 OrthoFinder output from all 47 species
Dac_g37004 APG3 translation peptide chain release factor *(PrfA) &... 0.02 OrthoFinder output from all 47 species
Dcu_g03764 APG3 translation peptide chain release factor *(PrfA) &... 0.01 OrthoFinder output from all 47 species
Dde_g25196 APG3 translation peptide chain release factor *(PrfA) &... 0.05 OrthoFinder output from all 47 species
GSVIVT01010979001 APG3 Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
LOC_Os11g43600.1 APG3, LOC_Os11g43600 PrfA-type translation peptide chain release factor 0.09 OrthoFinder output from all 47 species
Lfl_g30957 APG3 translation peptide chain release factor *(PrfA) &... 0.03 OrthoFinder output from all 47 species
Mp5g08280.1 APG3 PrfA-type translation peptide chain release factor 0.03 OrthoFinder output from all 47 species
Nbi_g29265 APG3 translation peptide chain release factor *(PrfA) &... 0.03 OrthoFinder output from all 47 species
Ore_g07055 APG3 translation peptide chain release factor *(PrfA) &... 0.02 OrthoFinder output from all 47 species
Pir_g17362 APG3 translation peptide chain release factor *(PrfA) &... 0.04 OrthoFinder output from all 47 species
Pnu_g26949 APG3 translation peptide chain release factor *(PrfA) &... 0.03 OrthoFinder output from all 47 species
Pp3c7_80V3.1 APG3, Pp3c7_80 Peptide chain release factor 1 0.03 OrthoFinder output from all 47 species
Ppi_g30209 APG3 translation peptide chain release factor *(PrfA) &... 0.01 OrthoFinder output from all 47 species
Smo141857 APG3 Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Solyc09g074650.3.1 APG3, Solyc09g074650 PrfA-type translation peptide chain release factor 0.04 OrthoFinder output from all 47 species
Spa_g22066 APG3 translation peptide chain release factor *(PrfA) &... 0.02 OrthoFinder output from all 47 species
Tin_g15456 APG3 translation peptide chain release factor *(PrfA) &... 0.03 OrthoFinder output from all 47 species
Zm00001e021069_P003 APG3, Zm00001e021069 PrfA-type translation peptide chain release factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEA Interproscan
BP GO:0006415 translational termination IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005139 PCRF 11 204
IPR000352 Pep_chain_release_fac_I 212 321
No external refs found!