Cre16.g655450 (ABCG40, PDR12,...)


Aliases : ABCG40, PDR12, ATABCG40, ATPDR12

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g655450

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00085720 PDR4, ATPDR4,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Aob_g05367 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g30586 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cre09.g395750 ATPDR3, PDR3 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Dcu_g17111 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05962 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os08g43120.1 PDR11, ATPDR11,... subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
MA_10426781g0010 PDR4, ATPDR4 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp4g06670.1 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc06g076930.2.1 ATPDR3, PDR3,... subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
Spa_g45712 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 866 1020
IPR013525 ABC_2_trans 442 647
IPR013525 ABC_2_trans 1165 1378
IPR003439 ABC_transporter-like_ATP-bd 60 263
No external refs found!