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  5. Cre16.g652950

Cre16.g652950


No description available


Gene families : OG0008546 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008546_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g652950
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Aop_g01393 No alias regulatory protein ELP1 of PRC1 histone... 0.04 OrthoFinder output from all 47 species
Aspi01Gene32678.t1 Aspi01Gene32678 regulatory protein ELP1 of PRC1 histone... 0.06 OrthoFinder output from all 47 species
Azfi_s0008.g011648 No alias regulatory protein ELP1 of PRC1 histone... 0.09 OrthoFinder output from all 47 species
Ceric.29G024200.1 Ceric.29G024200 regulatory protein ELP1 of PRC1 histone... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020780.19 No alias No description available 0.1 OrthoFinder output from all 47 species
Dac_g13525 No alias regulatory protein ELP1 of PRC1 histone... 0.08 OrthoFinder output from all 47 species
GSVIVT01008170001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Gb_40172 No alias LHP1-regulatory component ELP1 of PRC1 histone... 0.13 OrthoFinder output from all 47 species
LOC_Os09g06560.1 LOC_Os09g06560 LHP1-regulatory component ELP1 of PRC1 histone... 0.08 OrthoFinder output from all 47 species
Len_g07259 No alias regulatory protein ELP1 of PRC1 histone... 0.02 OrthoFinder output from all 47 species
MA_10431892g0020 No alias LHP1-regulatory component ELP1 of PRC1 histone... 0.09 OrthoFinder output from all 47 species
Mp4g09220.1 No alias LHP1-regulatory component ELP1 of PRC1 histone... 0.1 OrthoFinder output from all 47 species
Nbi_g24640 No alias regulatory protein ELP1 of PRC1 histone... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0218.g026104 No alias regulatory protein ELP1 of PRC1 histone... 0.06 OrthoFinder output from all 47 species
Sam_g08424 No alias regulatory protein ELP1 of PRC1 histone... 0.05 OrthoFinder output from all 47 species
Solyc03g114690.4.1 Solyc03g114690 LHP1-regulatory component ELP1 of PRC1 histone... 0.08 OrthoFinder output from all 47 species
Spa_g56089 No alias regulatory protein ELP1 of PRC1 histone... 0.02 OrthoFinder output from all 47 species
Tin_g28315 No alias regulatory protein ELP1 of PRC1 histone... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000796 condensin complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR022100 Mcl1_mid 453 756
IPR001680 WD40_repeat 236 266
No external refs found!