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  5. Cre12.g556911

Cre12.g556911 (ATMRE11, MRE11)


Aliases : ATMRE11, MRE11

Description : DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.MRE11 component


Gene families : OG0004519 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004519_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g556911

Target Alias Description ECC score Gene Family Method Actions
Aev_g41827 ATMRE11, MRE11 component *(MRE11) of DNA resection MRE11-RAD50-NBS1... 0.02 OrthoFinder output from all 47 species
Cba_g19949 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g20299 ATMRE11, MRE11 component *(MRE11) of DNA resection MRE11-RAD50-NBS1... 0.03 OrthoFinder output from all 47 species
GSVIVT01014441001 ATMRE11, MRE11 DNA damage response.DNA repair mechanisms.homologous... 0.02 OrthoFinder output from all 47 species
Gb_07107 ATMRE11, MRE11 Double-strand break repair protein MRE11 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Spa_g06591 ATMRE11, MRE11 component *(MRE11) of DNA resection MRE11-RAD50-NBS1... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR007281 Mre11_DNA-bd 300 484
IPR004843 Calcineurin-like_PHP_ApaH 8 252
No external refs found!