Aliases : CLPB3, CLPB-P, APG6
Description : Chaperone protein ClpB3, chloroplastic OS=Arabidopsis thaliana
Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00016p00164160 | HSP93-V, DCA1,... | External stimuli response.temperature.Hsp... | 0.01 | OrthoFinder output from all 47 species | |
AT3G48870 | HSP93-III,... | Clp ATPase | 0.01 | OrthoFinder output from all 47 species | |
Adi_g051011 | CLPB3, CLPB-P, APG6 | organellar chaperone *(Clp-p/Clp-m) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Adi_g058441 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g28850 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.01 | OrthoFinder output from all 47 species | |
Ala_g11691 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.01 | OrthoFinder output from all 47 species | |
Ala_g12182 | CLPB3, CLPB-P, APG6 | organellar chaperone *(Clp-p/Clp-m) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Als_g61977 | ATHSP101, HOT1, HSP101 | cytosolic chaperone *(Hsp101) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene47588.t1 | CLPB3, CLPB-P,... | organellar chaperone *(Clp-p/Clp-m) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.05G020300.1 | ATHSP101, HOT1,... | cytosolic chaperone *(Hsp101) & original description:... | 0.01 | OrthoFinder output from all 47 species | |
Ceric.18G061200.1 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g16054 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.01 | OrthoFinder output from all 47 species | |
Dde_g25408 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.01 | OrthoFinder output from all 47 species | |
Gb_20703 | HSP93-V, DCA1,... | chaperone component ClpC of chloroplast Clp-type protease complex | 0.01 | OrthoFinder output from all 47 species | |
LOC_Os04g32560.1 | HSP93-V, DCA1,... | chaperone component ClpC of chloroplast Clp-type protease complex | 0.03 | OrthoFinder output from all 47 species | |
Len_g59755 | CLPB3, CLPB-P, APG6 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
MA_178786g0010 | CLPB3, CLPB-P, APG6 | Chaperone protein ClpB2, chloroplastic OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
MA_28031g0010 | HSP93-V, DCA1,... | ATP-dependent Clp protease ATP-binding subunit ClpA... | 0.01 | OrthoFinder output from all 47 species | |
MA_763g0010 | CLPB4, CLPB-M, HSP98.7 | organellar chaperone (Clp-p|Clp-m) | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g09665 | CLPB3, CLPB-P, APG6 | organellar chaperone *(Clp-p/Clp-m) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Ore_g13933 | HSP93-V, DCA1,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g11806 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g16593 | CLPB3, CLPB-P, APG6 | organellar chaperone *(Clp-p/Clp-m) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0027.g009790 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.02 | OrthoFinder output from all 47 species | |
Smo439163 | HSP93-V, DCA1,... | External stimuli response.temperature.Hsp... | 0.01 | OrthoFinder output from all 47 species | |
Spa_g07909 | HSP93-V, DCA1,... | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Spa_g19032 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g46302 | CLPB3, CLPB-P, APG6 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g47608 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e008312_P001 | HSP93-V, DCA1,... | chaperone component ClpC of chloroplast Clp-type protease complex | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e040778_P001 | HSP93-V, DCA1,... | chaperone component ClpC of chloroplast Clp-type protease complex | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0004814 | arginine-tRNA ligase activity | IEP | HCCA |
BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006420 | arginyl-tRNA aminoacylation | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006553 | lysine metabolic process | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
MF | GO:0008839 | 4-hydroxy-tetrahydrodipicolinate reductase | IEP | HCCA |
MF | GO:0009055 | electron transfer activity | IEP | HCCA |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | HCCA |
BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | HCCA |
BP | GO:0009085 | lysine biosynthetic process | IEP | HCCA |
BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
BP | GO:0030261 | chromosome condensation | IEP | HCCA |
BP | GO:0032259 | methylation | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | HCCA |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
BP | GO:0046451 | diaminopimelate metabolic process | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
No external refs found! |