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Aliases : PDS3, PDS, PDE226
Description : Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.PDS phytoene desaturase
Gene families : OG0006245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006245_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00131p00071060 | PDS3, PDS,... | Secondary metabolism.terpenoids.terpenoid... | 0.02 | OrthoFinder output from all 47 species | |
| AT4G14210 | PDS3, PDS, PDE226 | phytoene desaturase 3 | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g13760 | PDS3, PDS, PDE226 | phytoene desaturase *(PDS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g09707 | PDS3, PDS, PDE226 | phytoene desaturase *(PDS) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g14870 | PDS3, PDS, PDE226 | phytoene desaturase *(PDS) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g01360 | PDS3, PDS, PDE226 | phytoene desaturase *(PDS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g36080 | PDS3, PDS, PDE226 | phytoene desaturase *(PDS) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.08G066500.1 | PDS3, PDS,... | phytoene desaturase *(PDS) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g11776 | PDS3, PDS, PDE226 | phytoene desaturase *(PDS) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g01529 | PDS3, PDS, PDE226 | phytoene desaturase *(PDS) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g23615 | PDS3, PDS, PDE226 | phytoene desaturase *(PDS) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01016650001 | PDS3, PDS, PDE226 | Secondary metabolism.terpenoids.terpenoid... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g08570.1 | PDS3, PDS,... | phytoene desaturase (PDS) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g09650 | PDS3, PDS, PDE226 | phytoene desaturase *(PDS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g01859 | PDS3, PDS, PDE226 | phytoene desaturase *(PDS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g14330.1 | PDS3, PDS, PDE226 | phytoene desaturase (PDS) | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g10268 | PDS3, PDS, PDE226 | phytoene desaturase *(PDS) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g17790 | PDS3, PDS, PDE226 | phytoene desaturase *(PDS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g31631 | PDS3, PDS, PDE226 | phytoene desaturase *(PDS) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Smo232430 | PDS3, PDS, PDE226 | Secondary metabolism.terpenoids.terpenoid... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e000618_P002 | PDS3, PDS,... | phytoene desaturase (PDS) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016491 | oxidoreductase activity | IEA | Interproscan |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | HCCA |
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003747 | translation release factor activity | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006415 | translational termination | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| MF | GO:0008079 | translation termination factor activity | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0022411 | cellular component disassembly | IEP | HCCA |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| MF | GO:0050661 | NADP binding | IEP | HCCA |
| MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
| MF | GO:0070402 | NADPH binding | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002937 | Amino_oxidase | 83 | 522 |
| No external refs found! |