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  5. Cre10.g458550

Cre10.g458550


Description : Protein translocation.chloroplast.thylakoid membrane SRP insertion system.STIC2 stromal sorting factor


Gene families : OG0004403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004403_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g458550
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00042050 evm_27.TU.AmTr_v1... Protein translocation.chloroplast.thylakoid membrane SRP... 0.02 OrthoFinder output from all 47 species
Aev_g04539 No alias stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Ala_g00370 No alias stromal sorting factor of thylakoid membrane SRP... 0.02 OrthoFinder output from all 47 species
Als_g23352 No alias stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Aop_g70924 No alias stromal sorting factor of thylakoid membrane SRP... 0.02 OrthoFinder output from all 47 species
Aspi01Gene29776.t1 Aspi01Gene29776 stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Ceric.35G009300.1 Ceric.35G009300 stromal sorting factor of thylakoid membrane SRP... 0.02 OrthoFinder output from all 47 species
Dcu_g21326 No alias stromal sorting factor of thylakoid membrane SRP... 0.01 OrthoFinder output from all 47 species
Ehy_g10854 No alias stromal sorting factor of thylakoid membrane SRP... 0.02 OrthoFinder output from all 47 species
GSVIVT01023623001 No alias Protein translocation.chloroplast.thylakoid membrane SRP... 0.02 OrthoFinder output from all 47 species
Gb_22716 No alias stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Mp2g03740.1 No alias stromal sorting factor of thylakoid membrane SRP... 0.04 OrthoFinder output from all 47 species
Nbi_g00106 No alias stromal sorting factor of thylakoid membrane SRP... 0.02 OrthoFinder output from all 47 species
Nbi_g08626 No alias stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Ppi_g04839 No alias stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Spa_g06795 No alias stromal sorting factor of thylakoid membrane SRP... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008565 obsolete protein transporter activity IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR004401 YbaB/EbfC 60 147
No external refs found!