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  5. Cre08.g384650

Cre08.g384650


Description : Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein


Gene families : OG0000684 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000684_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre08.g384650
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Als_g62328 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15375 No alias LHC-related protein *(ELIP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71952.t1 ELIP, ELIP1,... LHC-related protein *(ELIP) & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0262.g060797 No alias LHC-related protein *(ELIP) & original description: CDS=176-844 0.03 OrthoFinder output from all 47 species
Ceric.24G057500.1 Ceric.24G057500 LHC-related protein *(ELIP) & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01018044001 ELIP2 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Gb_01319 ELIP, ELIP1 ELIP LHC-related protein 0.02 OrthoFinder output from all 47 species
MA_10432488g0010 ELIP2 ELIP LHC-related protein 0.01 OrthoFinder output from all 47 species
Mp6g14520.1 ELIP2 ELIP LHC-related protein 0.03 OrthoFinder output from all 47 species
Ore_g27690 ELIP, ELIP1 LHC-related protein *(ELIP) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g29196 ELIP, ELIP1 LHC-related protein *(ELIP) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c19_18250V3.1 Pp3c19_18250 Chlorophyll A-B binding family protein 0.01 OrthoFinder output from all 47 species
Ppi_g08749 No alias LHC-related protein *(ELIP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13229 ELIP, ELIP1 LHC-related protein *(ELIP) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 105 218
No external refs found!