Cre08.g372250 (ATGCN5, GCN5)

Aliases : ATGCN5, GCN5

Description : ABC transporter F family member 5 OS=Arabidopsis thaliana

Gene families : OG0003045 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003045_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre08.g372250

Target	Alias	Description	ECC score	Gene Family Method
AT5G64840	ATGCN5, GCN5	general control non-repressible 5	0.05	OrthoFinder output from all 47 species
Aev_g05120	ATGCN5, GCN5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g04195	ATGCN5, GCN5	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Als_g16234	ATGCN5, GCN5	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aob_g02291	ATGCN5, GCN5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g07329	ATGCN5, GCN5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene62480.t1	ATGCN5, GCN5,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Azfi_s0168.g054635	ATGCN5, GCN5	not classified & original description: CDS=239-2245	0.04	OrthoFinder output from all 47 species
Cba_g38272	ATGCN5, GCN5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.29G008900.1	ATGCN5, GCN5,...	not classified & original description: pacid=50624672...	0.04	OrthoFinder output from all 47 species
Dac_g12683	ATGCN5, GCN5	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Dde_g07651	ATGCN5, GCN5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g07834	ATGCN5, GCN5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01022235001	ATGCN5, GCN5	ABC transporter F family member 5 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Gb_01082	ATGCN5, GCN5	ABC transporter F family member 5 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species
LOC_Os11g39020.1	ATGCN5, GCN5,...	ABC transporter F family member 5 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Len_g13114	ATGCN5, GCN5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g07903	ATGCN5, GCN5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_10437027g0010	ATGCN5, GCN5	ABC transporter F family member 5 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Mp7g11090.1	ATGCN5, GCN5	ABC transporter F family member 5 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Msp_g14610	ATGCN5, GCN5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g30372	ATGCN5, GCN5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g11340	ATGCN5, GCN5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g19383	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc04g051800.3.1	ATGCN5, GCN5,...	ABC transporter F family member 5 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Spa_g18685	ATGCN5, GCN5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g11682	ATGCN5, GCN5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e011297_P001	ATGCN5, GCN5,...	ABC transporter F family member 5 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004325	ferrochelatase activity	IEP	HCCA
MF	GO:0004408	holocytochrome-c synthase activity	IEP	HCCA
MF	GO:0005244	voltage-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0005247	voltage-gated chloride channel activity	IEP	HCCA
MF	GO:0005253	monoatomic anion channel activity	IEP	HCCA
MF	GO:0005254	chloride channel activity	IEP	HCCA
CC	GO:0005739	mitochondrion	IEP	HCCA
BP	GO:0006766	vitamin metabolic process	IEP	HCCA
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0006771	riboflavin metabolic process	IEP	HCCA
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	HCCA
BP	GO:0006783	heme biosynthetic process	IEP	HCCA
BP	GO:0006820	monoatomic anion transport	IEP	HCCA
BP	GO:0006821	chloride transport	IEP	HCCA
MF	GO:0008308	voltage-gated monoatomic anion channel activity	IEP	HCCA
MF	GO:0008509	monoatomic anion transmembrane transporter activity	IEP	HCCA
MF	GO:0008686	3,4-dihydroxy-2-butanone-4-phosphate synthase activity	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
BP	GO:0009231	riboflavin biosynthetic process	IEP	HCCA
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	HCCA
MF	GO:0015108	chloride transmembrane transporter activity	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016846	carbon-sulfur lyase activity	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
MF	GO:0022832	voltage-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
BP	GO:0042168	heme metabolic process	IEP	HCCA
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	HCCA
BP	GO:0042440	pigment metabolic process	IEP	HCCA
BP	GO:0042726	flavin-containing compound metabolic process	IEP	HCCA
BP	GO:0042727	flavin-containing compound biosynthetic process	IEP	HCCA
BP	GO:0046148	pigment biosynthetic process	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	133	308
IPR032781	ABC_tran_Xtn	347	432
IPR003439	ABC_transporter-like_ATP-bd	461	592

External Links

No external refs found!

Cre08.g372250 (ATGCN5, GCN5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation