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  5. Cre07.g344050

Cre07.g344050 (TOZ)


Aliases : TOZ

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.TOZ assembly factor


Gene families : OG0004926 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004926_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g344050
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00053570 TOZ,... Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 OrthoFinder output from all 47 species
AT5G16750 TOZ Transducin family protein / WD-40 repeat family protein 0.2 OrthoFinder output from all 47 species
Adi_g055233 TOZ SSU processome assembly factor *(TOZ) & original... 0.02 OrthoFinder output from all 47 species
Aev_g17444 TOZ SSU processome assembly factor *(TOZ) & original... 0.03 OrthoFinder output from all 47 species
Ala_g03690 TOZ SSU processome assembly factor *(TOZ) & original... 0.01 OrthoFinder output from all 47 species
Als_g14040 TOZ SSU processome assembly factor *(TOZ) & original... 0.01 OrthoFinder output from all 47 species
Aop_g31879 TOZ SSU processome assembly factor *(TOZ) & original... 0.01 OrthoFinder output from all 47 species
Azfi_s0068.g036365 TOZ SSU processome assembly factor *(TOZ) & original... 0.05 OrthoFinder output from all 47 species
Ceric.15G036100.1 TOZ, Ceric.15G036100 SSU processome assembly factor *(TOZ) & original... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000704.61 MSI1, MEE70, ATMSI1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000704.62 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g09670 TOZ SSU processome assembly factor *(TOZ) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g01937 TOZ SSU processome assembly factor *(TOZ) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01024351001 TOZ Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 OrthoFinder output from all 47 species
Gb_13772 TOZ SSU processome assembly factor (TOZ) 0.09 OrthoFinder output from all 47 species
LOC_Os04g50660.1 TOZ, LOC_Os04g50660 SSU processome assembly factor (TOZ) 0.21 OrthoFinder output from all 47 species
MA_10601g0010 TOZ no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10601g0020 TOZ no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_566936g0010 TOZ no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp8g08070.1 TOZ SSU processome assembly factor (TOZ) 0.1 OrthoFinder output from all 47 species
Msp_g13701 TOZ SSU processome assembly factor *(TOZ) & original... 0.02 OrthoFinder output from all 47 species
Ore_g36827 TOZ SSU processome assembly factor *(TOZ) & original... 0.01 OrthoFinder output from all 47 species
Pnu_g21415 TOZ SSU processome assembly factor *(TOZ) & original... 0.01 OrthoFinder output from all 47 species
Ppi_g32102 TOZ SSU processome assembly factor *(TOZ) & original... 0.01 OrthoFinder output from all 47 species
Sam_g14264 No alias SSU processome assembly factor *(TOZ) & original... 0.03 OrthoFinder output from all 47 species
Smo80645 TOZ Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder output from all 47 species
Solyc03g097160.4.1 TOZ, Solyc03g097160 SSU processome assembly factor (TOZ) 0.13 OrthoFinder output from all 47 species
Tin_g15654 TOZ SSU processome assembly factor *(TOZ) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e007090_P001 TOZ, Zm00001e007090 SSU processome assembly factor (TOZ) 0.05 OrthoFinder output from all 47 species
Zm00001e041546_P002 TOZ, Zm00001e041546 SSU processome assembly factor (TOZ) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0017150 tRNA dihydrouridine synthase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
CC GO:0034457 Mpp10 complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0106413 dihydrouridine synthase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR013934 Utp13_C 760 917
IPR001680 WD40_repeat 619 654
IPR001680 WD40_repeat 580 612
IPR001680 WD40_repeat 176 213
IPR001680 WD40_repeat 658 696
IPR001680 WD40_repeat 133 170
IPR001680 WD40_repeat 218 255
IPR001680 WD40_repeat 483 521
No external refs found!