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  5. Cre07.g338900

Cre07.g338900


Description : RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor


Gene families : OG0005285 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005285_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g338900

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00036310 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000691.5 No alias Zinc finger CCCH domain-containing protein 59 OS=Oryza... 0.02 OrthoFinder output from all 47 species
LOC_Os09g19940.1 LOC_Os09g19940 C3H zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
Mp7g14310.1 No alias C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004363 glutathione synthase activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006750 glutathione biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0019184 nonribosomal peptide biosynthetic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:1904091 non-ribosomal peptide synthetase activity IEP HCCA
InterPro domains Description Start Stop
IPR006767 Cwf19-like_C_dom-2 589 660
IPR000504 RRM_dom 332 400
IPR006768 Cwf19-like_C_dom-1 436 551
No external refs found!