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  5. Cre07.g316850

Cre07.g316850 (MCM4)


Aliases : MCM4

Description : Cell cycle.interphase.DNA replication.preinitiation.MCM replicative DNA helicase complex.MCM4 component


Gene families : OG0001056 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001056_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g316850
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00128450 MCM4,... Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.08 OrthoFinder output from all 47 species
AMTR_s00008p00218750 MCM9,... Cell cycle.interphase.DNA replication.initiation.MCM8-9... 0.03 OrthoFinder output from all 47 species
AMTR_s00057p00030490 MCM7, PRL,... Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.05 OrthoFinder output from all 47 species
AT2G16440 MCM4 Minichromosome maintenance (MCM2/3/5) family protein 0.09 OrthoFinder output from all 47 species
AT4G02060 MCM7, PRL Minichromosome maintenance (MCM2/3/5) family protein 0.09 OrthoFinder output from all 47 species
Adi_g007814 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.02 OrthoFinder output from all 47 species
Ala_g24409 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.07 OrthoFinder output from all 47 species
Ala_g28206 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.08 OrthoFinder output from all 47 species
Als_g03794 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.01 OrthoFinder output from all 47 species
Als_g06966 MCM4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07824 MCM4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07825 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.05 OrthoFinder output from all 47 species
Als_g11754 MCM4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g10715 MCM9 component *(MCM9) of MCM8-9 cell cycle auxiliary complex... 0.01 OrthoFinder output from all 47 species
Aop_g09863 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.08 OrthoFinder output from all 47 species
Aop_g23244 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.1 OrthoFinder output from all 47 species
Aspi01Gene22827.t1 MCM4, Aspi01Gene22827 component *(MCM4) of MCM replicative DNA helicase... 0.06 OrthoFinder output from all 47 species
Aspi01Gene25633.t1 MCM4, Aspi01Gene25633 component *(MCM4) of MCM replicative DNA helicase... 0.06 OrthoFinder output from all 47 species
Aspi01Gene25932.t1 MCM7, PRL,... component *(MCM7) of MCM replicative DNA helicase... 0.05 OrthoFinder output from all 47 species
Aspi01Gene40175.t1 MCM9, Aspi01Gene40175 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0544.g076399 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.13 OrthoFinder output from all 47 species
Ceric.04G002100.1 MCM7, PRL,... component *(MCM7) of MCM replicative DNA helicase... 0.14 OrthoFinder output from all 47 species
Ceric.10G009500.1 MCM4, Ceric.10G009500 component *(MCM4) of MCM replicative DNA helicase... 0.15 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000144.164 MCM4 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.12 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000241.38 MCM7, PRL Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.11 OrthoFinder output from all 47 species
Dac_g06469 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.1 OrthoFinder output from all 47 species
Dac_g14939 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.1 OrthoFinder output from all 47 species
Dac_g15991 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.1 OrthoFinder output from all 47 species
Dcu_g05722 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.12 OrthoFinder output from all 47 species
Dcu_g40402 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.07 OrthoFinder output from all 47 species
Dcu_g42313 MCM9 component *(MCM9) of MCM8-9 cell cycle auxiliary complex... 0.03 OrthoFinder output from all 47 species
Ehy_g01597 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.02 OrthoFinder output from all 47 species
GSVIVT01024207001 MCM4 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.13 OrthoFinder output from all 47 species
GSVIVT01028118001 MCM7, PRL Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.13 OrthoFinder output from all 47 species
Gb_09191 MCM4 component MCM4 of MCM replicative DNA helicase complex 0.09 OrthoFinder output from all 47 species
Gb_35205 MCM7, PRL component MCM7 of MCM replicative DNA helicase complex 0.13 OrthoFinder output from all 47 species
Gb_36024 MCM4 component MCM4 of MCM replicative DNA helicase complex 0.1 OrthoFinder output from all 47 species
LOC_Os01g36390.1 MCM4, LOC_Os01g36390 component MCM4 of MCM replicative DNA helicase complex 0.13 OrthoFinder output from all 47 species
LOC_Os12g37400.1 MCM7, PRL, LOC_Os12g37400 component MCM7 of MCM replicative DNA helicase complex 0.18 OrthoFinder output from all 47 species
Len_g00736 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.08 OrthoFinder output from all 47 species
Lfl_g19272 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.06 OrthoFinder output from all 47 species
Lfl_g39364 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.06 OrthoFinder output from all 47 species
MA_10426237g0010 MCM7, PRL component MCM7 of MCM replicative DNA helicase complex 0.12 OrthoFinder output from all 47 species
MA_10434231g0010 MCM4 DNA replication licensing factor MCM4 OS=Oryza sativa... 0.13 OrthoFinder output from all 47 species
Mp2g02600.1 MCM7, PRL component MCM7 of MCM replicative DNA helicase complex 0.12 OrthoFinder output from all 47 species
Mp3g02380.1 MCM4 component MCM4 of MCM replicative DNA helicase complex 0.08 OrthoFinder output from all 47 species
Mp4g02430.1 MCM9 component MCM9 of MCM8-9 cell cycle auxiliary complex 0.08 OrthoFinder output from all 47 species
Msp_g06139 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.1 OrthoFinder output from all 47 species
Msp_g09222 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.09 OrthoFinder output from all 47 species
Nbi_g03098 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.07 OrthoFinder output from all 47 species
Nbi_g04377 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.08 OrthoFinder output from all 47 species
Ore_g25232 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.01 OrthoFinder output from all 47 species
Ore_g27144 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.02 OrthoFinder output from all 47 species
Ore_g29782 MCM9 component *(MCM9) of MCM8-9 cell cycle auxiliary complex... 0.02 OrthoFinder output from all 47 species
Ppi_g01337 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.06 OrthoFinder output from all 47 species
Ppi_g25980 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004187 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0121.g021422 MCM9 component *(MCM9) of MCM8-9 cell cycle auxiliary complex... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0298.g027193 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.06 OrthoFinder output from all 47 species
Sam_g06717 No alias component *(MCM4) of MCM replicative DNA helicase... 0.06 OrthoFinder output from all 47 species
Sam_g09734 No alias component *(MCM7) of MCM replicative DNA helicase... 0.07 OrthoFinder output from all 47 species
Sam_g27151 No alias component *(MCM7) of MCM replicative DNA helicase... 0.07 OrthoFinder output from all 47 species
Smo163959 MCM7, PRL Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.02 OrthoFinder output from all 47 species
Solyc01g079500.4.1 MCM7, PRL, Solyc01g079500 component MCM7 of MCM replicative DNA helicase complex 0.13 OrthoFinder output from all 47 species
Solyc01g105520.3.1 MCM9, Solyc01g105520 component MCM9 of MCM8-9 cell cycle auxiliary complex 0.06 OrthoFinder output from all 47 species
Solyc01g110130.3.1 MCM4, Solyc01g110130 component MCM4 of MCM replicative DNA helicase complex 0.09 OrthoFinder output from all 47 species
Spa_g10751 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.1 OrthoFinder output from all 47 species
Spa_g11927 MCM7, PRL not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g11928 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.08 OrthoFinder output from all 47 species
Spa_g43315 MCM7, PRL not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g44409 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.02 OrthoFinder output from all 47 species
Tin_g06082 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.11 OrthoFinder output from all 47 species
Tin_g12164 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.09 OrthoFinder output from all 47 species
Zm00001e002873_P001 MCM7, PRL, Zm00001e002873 component MCM7 of MCM replicative DNA helicase complex 0.19 OrthoFinder output from all 47 species
Zm00001e018214_P001 MCM7, PRL, Zm00001e018214 component MCM7 of MCM replicative DNA helicase complex 0.14 OrthoFinder output from all 47 species
Zm00001e026379_P001 MCM4, Zm00001e026379 component MCM4 of MCM replicative DNA helicase complex 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006270 DNA replication initiation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004146 dihydrofolate reductase activity IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009396 folic acid-containing compound biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0046653 tetrahydrofolate metabolic process IEP HCCA
BP GO:0046654 tetrahydrofolate biosynthetic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR027925 MCM_N 161 256
IPR033762 MCM_OB 277 403
IPR001208 MCM_dom 504 721
No external refs found!