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  5. Cre05.g243050

Cre05.g243050 (TRXF2, ATF2)


Aliases : TRXF2, ATF2

Description : Redox homeostasis.chloroplast redox homeostasis.F-type thioredoxin


Gene families : OG0001099 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001099_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre05.g243050
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00119540 ATF1, TRXF1,... Redox homeostasis.chloroplast redox homeostasis.F-type... 0.03 OrthoFinder output from all 47 species
AT3G02730 ATF1, TRXF1 thioredoxin F-type 1 0.06 OrthoFinder output from all 47 species
AT5G16400 TRXF2, ATF2 thioredoxin F2 0.18 OrthoFinder output from all 47 species
Adi_g003203 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102129 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03766 ATF1, TRXF1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g06364 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02991 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g00422 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.08 OrthoFinder output from all 47 species
Als_g07635 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02814 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02927 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06684 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11775 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0045.g030104 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: CDS=10-552 0.01 OrthoFinder output from all 47 species
Azfi_s0388.g067618 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: CDS=462-1067 0.02 OrthoFinder output from all 47 species
Cba_g12466 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g37399 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.02G053000.1 TRXF2, ATF2,... F-type thioredoxin *(Trx-F) & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.37G049100.1 ATHM4, TRX-M4,... not classified & original description: pacid=50616292... 0.02 OrthoFinder output from all 47 species
Dac_g12526 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g25843 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g02038 ATF1, TRXF1 plastidial thioredoxin *(TrxL1) & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01019070001 TRXF2, ATF2 Redox homeostasis.chloroplast redox homeostasis.F-type... 0.03 OrthoFinder output from all 47 species
Gb_20154 ATF1, TRXF1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g18423 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11575 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.01 OrthoFinder output from all 47 species
MA_5229g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g29081 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g02641 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g14018 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g26787 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12320 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.08 OrthoFinder output from all 47 species
Pnu_g19425 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g00498 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g30576 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g32202 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33020 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015100 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: CDS=110-658 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0134.g022310 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: CDS=118-813 0.04 OrthoFinder output from all 47 species
Smo110708 TRXF2, ATF2 Redox homeostasis.chloroplast redox homeostasis.F-type... 0.02 OrthoFinder output from all 47 species
Smo77812 ATH5, ATTRX5, TRX5, LIV1 No description available 0.02 OrthoFinder output from all 47 species
Solyc05g056300.4.1 ATF1, TRXF1,... F-type thioredoxin 0.07 OrthoFinder output from all 47 species
Spa_g22200 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g21213 TRXF2, ATF2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e027512_P002 TRXF2, ATF2,... F-type thioredoxin 0.05 OrthoFinder output from all 47 species
Zm00001e040421_P002 TRXF2, ATF2,... F-type thioredoxin 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 75 173
No external refs found!