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  5. Cre04.g223900

Cre04.g223900 (CASP, AtCASP)


Aliases : CASP, AtCASP

No description available


Gene families : OG0004640 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004640_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre04.g223900

Target Alias Description ECC score Gene Family Method Actions
AT3G18480 CASP, AtCASP CCAAT-displacement protein alternatively spliced product 0.03 OrthoFinder output from all 47 species
Aev_g01539 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.02 OrthoFinder output from all 47 species
Als_g01937 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.03 OrthoFinder output from all 47 species
Aob_g06697 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.01 OrthoFinder output from all 47 species
Azfi_s0003.g007796 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.02 OrthoFinder output from all 47 species
Ceric.18G007100.1 CASP, AtCASP,... Golgin-type membrane tethering protein *(CASP) &... 0.05 OrthoFinder output from all 47 species
Dcu_g12650 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.03 OrthoFinder output from all 47 species
Ehy_g02808 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.01 OrthoFinder output from all 47 species
GSVIVT01008258001 CASP, AtCASP Vesicle trafficking.target membrane tethering.Golgi... 0.02 OrthoFinder output from all 47 species
LOC_Os03g50300.1 CASP, AtCASP,... golgin (CASP) 0.03 OrthoFinder output from all 47 species
Lfl_g01912 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.04 OrthoFinder output from all 47 species
Nbi_g04869 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.02 OrthoFinder output from all 47 species
Ppi_g14626 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.02 OrthoFinder output from all 47 species
Smo173154 CASP, AtCASP Vesicle trafficking.target membrane tethering.Golgi... 0.01 OrthoFinder output from all 47 species
Solyc06g069210.3.1 CASP, AtCASP,... golgin (CASP) 0.02 OrthoFinder output from all 47 species
Spa_g26747 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.02 OrthoFinder output from all 47 species
Tin_g20724 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.02 OrthoFinder output from all 47 species
Zm00001e012195_P001 CASP, AtCASP,... golgin (CASP) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006891 intra-Golgi vesicle-mediated transport IEA Interproscan
CC GO:0030173 obsolete integral component of Golgi membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR012955 CASP_C 405 609
IPR012955 CASP_C 719 791
No external refs found!