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  5. Cre03.g208050

Cre03.g208050


Description : Lipid metabolism.fatty acid synthesis.plastidial Type II fatty acid synthase (ptFAS) system.hydroxyacyl-ACP dehydratase (ptHD)


Gene families : OG0004877 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004877_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g208050
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00201890 evm_27.TU.AmTr_v1... Lipid metabolism.fatty acid synthesis.plastidial Type II... 0.02 OrthoFinder output from all 47 species
AT2G22230 No alias Thioesterase superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G10160 No alias Thioesterase superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g06777 No alias hydroxyacyl-ACP dehydratase *(ptHD)) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g31791 No alias hydroxyacyl-ACP dehydratase *(ptHD)) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09110 No alias hydroxyacyl-ACP dehydratase *(ptHD)) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.28G048200.1 Ceric.28G048200 hydroxyacyl-ACP dehydratase *(ptHD)) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01029788001 No alias Lipid metabolism.fatty acid synthesis.plastidial Type II... 0.02 OrthoFinder output from all 47 species
LOC_Os08g12840.1 LOC_Os08g12840 hydroxyacyl-ACP dehydratase (ptHD) 0.01 OrthoFinder output from all 47 species
Solyc01g105060.3.1 Solyc01g105060 hydroxyacyl-ACP dehydratase (ptHD) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR013114 FabA_FabZ 64 190
No external refs found!