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  5. Cre03.g153050

Cre03.g153050


Description : RNA biosynthesis.transcriptional activation.NIN-like superfamily.RKD transcription factor


Gene families : OG0000385 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000385_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g153050

Target Alias Description ECC score Gene Family Method Actions
Adi_g019526 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.01 OrthoFinder output from all 47 species
Aop_g68483 No alias germ cell differentiation factor *(RKD) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene37701.t1 Aspi01Gene37701 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01785 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.01 OrthoFinder output from all 47 species
Ceric.1Z292900.1 Ceric.1Z292900 SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000042.244 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001443.5 No alias No description available 0.01 OrthoFinder output from all 47 species
Ehy_g10890 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Gb_36930 No alias transcription factor (RKD) 0.01 OrthoFinder output from all 47 species
Mp2g11310.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Smo118783 No alias RNA biosynthesis.transcriptional activation.NIN-like... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP HCCA
BP GO:0002949 tRNA threonylcarbamoyladenosine modification IEP HCCA
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP HCCA
MF GO:0005347 ATP transmembrane transporter activity IEP HCCA
MF GO:0005471 ATP:ADP antiporter activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006862 nucleotide transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008514 organic anion transmembrane transporter activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015215 nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015217 ADP transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0070525 tRNA threonylcarbamoyladenosine metabolic process IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003035 RWP-RK_dom 1108 1154
No external refs found!