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  5. Cre02.g097550

Cre02.g097550


Description : Probable transcriptional regulatory protein At2g25830 OS=Arabidopsis thaliana


Gene families : OG0006549 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006549_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g097550
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AT2G25830 No alias YebC-related 0.06 OrthoFinder output from all 47 species
Aop_g12536 No alias translational activator *(TACO) of component COX1 of... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020562.40 No alias Probable transcriptional regulatory protein At2g25830... 0.02 OrthoFinder output from all 47 species
Dac_g11780 No alias translational activator *(TACO) of component COX1 of... 0.01 OrthoFinder output from all 47 species
Dcu_g17599 No alias translational activator *(TACO) of component COX1 of... 0.02 OrthoFinder output from all 47 species
Ehy_g10189 No alias translational activator *(TACO) of component COX1 of... 0.02 OrthoFinder output from all 47 species
GSVIVT01035625001 No alias Probable transcriptional regulatory protein At2g25830... 0.02 OrthoFinder output from all 47 species
Lfl_g10571 No alias translational activator *(TACO) of component COX1 of... 0.02 OrthoFinder output from all 47 species
MA_10435678g0010 No alias Probable transcriptional regulatory protein At2g25830... 0.02 OrthoFinder output from all 47 species
Msp_g02368 No alias translational activator *(TACO) of component COX1 of... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013545 No alias translational activator *(TACO) of component COX1 of... 0.02 OrthoFinder output from all 47 species
Spa_g05990 No alias translational activator *(TACO) of component COX1 of... 0.02 OrthoFinder output from all 47 species
Zm00001e032222_P003 Zm00001e032222 Probable transcriptional regulatory protein At2g25830... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP HCCA
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019238 cyclohydrolase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002876 Transcrip_reg_TACO1-like 55 291
No external refs found!