Cre02.g076400 (VPS25)

Aliases : VPS25

Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-II complex.VPS25 component

Gene families : OG0005916 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005916_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre02.g076400
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
AT4G19003	VPS25	E2F/DP family winged-helix DNA-binding domain	0.02	OrthoFinder output from all 47 species
Len_g08190	VPS25	component *(VPS25) of ESCRT-II complex & original...	0.02	OrthoFinder output from all 47 species
Mp3g14870.1	VPS25	component VPS25 of ESCRT-II complex	0.03	OrthoFinder output from all 47 species
Nbi_g01821	VPS25	component *(VPS25) of ESCRT-II complex & original...	0.01	OrthoFinder output from all 47 species
Tin_g03664	VPS25	component *(VPS25) of ESCRT-II complex & original...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000814	ESCRT II complex	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0036452	ESCRT complex	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0071985	multivesicular body sorting pathway	IEA	Interproscan
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
CC	GO:0016592	mediator complex	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
CC	GO:0030008	TRAPP complex	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008570	ESCRT-II_cplx_Vps25-sub	10	141

External Links

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Cre02.g076400 (VPS25)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation