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  5. Cre01.g050950

Cre01.g050950


Description : Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.geranylgeranyl reductase ChlP


Gene families : OG0004137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g050950
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00262670 evm_27.TU.AmTr_v1... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 OrthoFinder output from all 47 species
AT1G74470 No alias Pyridine nucleotide-disulphide oxidoreductase family protein 0.08 OrthoFinder output from all 47 species
Adi_g056383 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056384 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g114339 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g04516 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07828 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g06864 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0031.g024448 No alias geranylgeranyl reductase *(CHLP) & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g01046 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G039000.1 Ceric.02G039000 geranylgeranyl reductase *(CHLP) & original description:... 0.1 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000144.20 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.07 OrthoFinder output from all 47 species
Dac_g01569 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16322 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g02816 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g24648 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01007996001 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.06 OrthoFinder output from all 47 species
Gb_34162 No alias geranylgeranyl reductase (ChlP) 0.08 OrthoFinder output from all 47 species
LOC_Os02g51080.1 LOC_Os02g51080 geranylgeranyl reductase (ChlP) 0.07 OrthoFinder output from all 47 species
Len_g03280 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.06 OrthoFinder output from all 47 species
Len_g21684 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g11797 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.04 OrthoFinder output from all 47 species
MA_189742g0010 No alias geranylgeranyl reductase (ChlP) 0.02 OrthoFinder output from all 47 species
Mp4g20130.1 No alias geranylgeranyl reductase (ChlP) 0.14 OrthoFinder output from all 47 species
Msp_g07857 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g05306 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g16810 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59572 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16608 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015786 No alias geranylgeranyl reductase *(CHLP) & original description:... 0.04 OrthoFinder output from all 47 species
Sam_g16455 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.01 OrthoFinder output from all 47 species
Smo271030 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.07 OrthoFinder output from all 47 species
Solyc01g088310.3.1 Solyc01g088310 geranylgeranyl reductase (ChlP) 0.01 OrthoFinder output from all 47 species
Solyc03g115980.1.1 Solyc03g115980 geranylgeranyl reductase (ChlP) 0.1 OrthoFinder output from all 47 species
Spa_g09495 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40506 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50719 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g04005 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e015812_P003 Zm00001e015812 geranylgeranyl reductase (ChlP) 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0071949 FAD binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004418 hydroxymethylbilane synthase activity IEP HCCA
MF GO:0004655 porphobilinogen synthase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002938 FAD-bd 80 368
No external refs found!