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  5. GSVIVT01038572001

GSVIVT01038572001 (TAP38, PPH1)


Aliases : TAP38, PPH1

Description : Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.phosphorylation/dephosphorylation.PPH1/TAP38 phosphatase


Gene families : OG0006074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006074_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01038572001
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00152490 TAP38, PPH1,... Photosynthesis.photophosphorylation.photosystem... 0.08 OrthoFinder output from all 47 species
Adi_g108888 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.08 OrthoFinder output from all 47 species
Aev_g12075 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g03798 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.08 OrthoFinder output from all 47 species
Als_g03696 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.1 OrthoFinder output from all 47 species
Aob_g25702 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g04768 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene21014.t1 TAP38, PPH1,... phosphatase *(PPH1/TAP38) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g67880 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g05668 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g10853 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.11 OrthoFinder output from all 47 species
Dde_g06065 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g11959 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g37130.1 TAP38, PPH1,... photosynthetic acclimation PPH1/TAP38 phosphatase 0.06 OrthoFinder output from all 47 species
Len_g10295 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g11522 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10427903g0010 TAP38, PPH1 Protein phosphatase 2C 57 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_53012g0010 TAP38, PPH1 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_74291g0010 TAP38, PPH1 Probable protein phosphatase 2C 5 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Nbi_g10658 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g18172 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g05862 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g00856 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.09 OrthoFinder output from all 47 species
Sam_g17042 No alias phosphatase *(PPH1/TAP38) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g17043 No alias phosphatase *(PPH1/TAP38) & original description: none 0.05 OrthoFinder output from all 47 species
Smo233392 TAP38, PPH1 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Solyc03g082960.2.1 TAP38, PPH1,... photosynthetic acclimation PPH1/TAP38 phosphatase 0.08 OrthoFinder output from all 47 species
Spa_g15006 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g06521 TAP38, PPH1 phosphatase *(PPH1/TAP38) & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e020739_P001 TAP38, PPH1,... photosynthetic acclimation PPH1/TAP38 phosphatase 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 178 457
No external refs found!