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Description : Polygalacturonase OS=Prunus persica
Gene families : OG0008809 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008809_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01038241001 | |
| Cluster | HCCA: Cluster_81 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00074p00182020 | evm_27.TU.AmTr_v1... | No description available | 0.06 | OrthoFinder output from all 47 species | |
| AT1G05660 | No alias | Pectin lyase-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT1G65570 | No alias | Pectin lyase-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G43870 | No alias | Pectin lyase-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT2G43880 | No alias | Pectin lyase-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT2G43890 | No alias | Pectin lyase-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G59850 | No alias | Pectin lyase-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01004007001 | No alias | Polygalacturonase OS=Prunus persica | 0.05 | OrthoFinder output from all 47 species | |
| Solyc08g014540.1.1 | Solyc08g014540 | Polygalacturonase OS=Prunus persica... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc12g019120.2.1 | Solyc12g019120 | Polygalacturonase OS=Prunus persica... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc12g019180.2.1 | Solyc12g019180 | Polygalacturonase OS=Prunus persica... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc12g019220.1.1 | Solyc12g019220 | Polygalacturonase OS=Prunus persica... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g019230.2.1 | Solyc12g019230 | Polygalacturonase OS=Prunus persica... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g096750.2.1 | Solyc12g096750 | Polygalacturonase OS=Prunus persica... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019002_P001 | Zm00001e019002 | Polygalacturonase OS=Prunus persica... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004650 | polygalacturonase activity | IEA | Interproscan |
| BP | GO:0005975 | carbohydrate metabolic process | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
| MF | GO:0010333 | terpene synthase activity | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000743 | Glyco_hydro_28 | 53 | 379 |
| No external refs found! |