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  5. GSVIVT01036289001

GSVIVT01036289001


Description : Probable protein phosphatase 2C 74 OS=Oryza sativa subsp. japonica


Gene families : OG0001301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001301_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01036289001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00158970 evm_27.TU.AmTr_v1... Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AMTR_s00065p00110200 evm_27.TU.AmTr_v1... Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AMTR_s00078p00164770 evm_27.TU.AmTr_v1... Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AMTR_s00099p00066170 evm_27.TU.AmTr_v1... Probable protein phosphatase 2C 74 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
AT1G07160 No alias Protein phosphatase 2C family protein 0.04 OrthoFinder output from all 47 species
AT2G30020 No alias Protein phosphatase 2C family protein 0.08 OrthoFinder output from all 47 species
Adi_g015965 PP2C5, ATHPP2C5 clade B phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g079500 PP2C5, ATHPP2C5 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g14659 No alias clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28060 No alias clade B phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g17266 No alias clade B phosphatase & original description: none 0.09 OrthoFinder output from all 47 species
Als_g61827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41535 No alias clade B phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07103 No alias clade B phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g13821 No alias clade B phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene06701.t1 Aspi01Gene06701 clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67179.t1 Aspi01Gene67179 clade B phosphatase & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.05G022700.1 Ceric.05G022700 clade B phosphatase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.05G022800.1 Ceric.05G022800 clade B phosphatase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.30G033900.1 Ceric.30G033900 not classified & original description: pacid=50608531... 0.03 OrthoFinder output from all 47 species
Dac_g27780 No alias clade B phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g39980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11278 No alias clade B phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13761 No alias clade B phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Gb_40834 No alias clade B phosphatase 0.03 OrthoFinder output from all 47 species
LOC_Os03g18150.1 LOC_Os03g18150 Probable protein phosphatase 2C 32 OS=Oryza sativa... 0.12 OrthoFinder output from all 47 species
LOC_Os11g13820.1 PP2C5, ATHPP2C5,... Probable protein phosphatase 2C 74 OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species
LOC_Os12g09640.1 LOC_Os12g09640 Probable protein phosphatase 2C 77 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Len_g23780 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g12331 PP2C5, ATHPP2C5 clade B phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
MA_10365511g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10426697g0020 No alias Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10429333g0010 No alias Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10430806g0020 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10432464g0020 No alias Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10435129g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_107720g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_1274g0010 No alias Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_128174g0010 PP2C5, ATHPP2C5 Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_12940g0010 No alias histone (H2B) 0.05 OrthoFinder output from all 47 species
MA_134564g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_1556703g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_166433g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_166433g0020 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_176702g0030 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_177086g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_183946g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_223907g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_3395g0010 No alias Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_87559g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_8880456g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9501502g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9664807g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp6g11540.1 No alias clade B phosphatase 0.04 OrthoFinder output from all 47 species
Msp_g10956 PP2C5, ATHPP2C5 clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13572 No alias clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24387 No alias clade B phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g33412 PP2C5, ATHPP2C5 clade B phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g10522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10523 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo13829 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Solyc05g052520.3.1 Solyc05g052520 Probable protein phosphatase 2C 30 OS=Arabidopsis... 0.1 OrthoFinder output from all 47 species
Solyc06g007190.4.1 Solyc06g007190 Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Spa_g16375 No alias clade B phosphatase & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g23587 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g39221 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g53363 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e001318_P001 Zm00001e001318 Probable protein phosphatase 2C 32 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Zm00001e011044_P001 Zm00001e011044 Probable protein phosphatase 2C 74 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Zm00001e038411_P002 Zm00001e038411 Probable protein phosphatase 2C 32 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 66 303
No external refs found!