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  5. GSVIVT01035727001

GSVIVT01035727001 (emb2410)


Aliases : emb2410

No description available


Gene families : OG0003871 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003871_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035727001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00142p00090900 emb2410,... No description available 0.09 OrthoFinder output from all 47 species
AT2G25660 emb2410 embryo defective 2410 0.07 OrthoFinder output from all 47 species
Adi_g024958 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Aev_g04899 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Ala_g14706 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.04 OrthoFinder output from all 47 species
Aop_g05251 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.02 OrthoFinder output from all 47 species
Azfi_s0010.g012375 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.04 OrthoFinder output from all 47 species
Ceric.14G073200.1 emb2410, Ceric.14G073200 component *(Tic236) of inner envelope TIC translocation... 0.06 OrthoFinder output from all 47 species
Cre05.g243150 emb2410 No description available 0.01 OrthoFinder output from all 47 species
Dde_g09822 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Gb_34395 emb2410 no description available(sp|w0ryd3|ssg4_orysj : 233.0) 0.03 OrthoFinder output from all 47 species
Gb_34400 emb2410 component Tic236 of inner envelope TIC translocation system 0.03 OrthoFinder output from all 47 species
LOC_Os01g08420.1 emb2410, LOC_Os01g08420 component Tic236 of inner envelope TIC translocation system 0.05 OrthoFinder output from all 47 species
MA_196707g0010 emb2410 no description available(sp|f4isl7|ti236_arath : 243.0) 0.03 OrthoFinder output from all 47 species
MA_59214g0010 emb2410 no description available(sp|f4isl7|ti236_arath : 202.0) 0.02 OrthoFinder output from all 47 species
Msp_g15704 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.04 OrthoFinder output from all 47 species
Msp_g23061 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g40556 No alias component *(Tic236) of inner envelope TIC translocation... 0.05 OrthoFinder output from all 47 species
Zm00001e016691_P001 emb2410, Zm00001e016691 component Tic236 of inner envelope TIC translocation system 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007452 TamB 1769 2162
No external refs found!