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  5. GSVIVT01035612001

GSVIVT01035612001 (ICU4, ATHB15, ATHB-15, CNA)


Aliases : ICU4, ATHB15, ATHB-15, CNA

Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.HD-ZIP III transcription factor


Gene families : OG0000446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000446_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035612001
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00085520 ICU4, ATHB15,... RNA biosynthesis.transcriptional activation.HB... 0.06 OrthoFinder output from all 47 species
AMTR_s00148p00033940 PHB-1D, ATHB-14,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AT1G52150 ICU4, ATHB15,... Homeobox-leucine zipper family protein / lipid-binding... 0.04 OrthoFinder output from all 47 species
AT4G32880 HB-8, ATHB8, ATHB-8 homeobox gene 8 0.06 OrthoFinder output from all 47 species
AT5G60690 IFL1, IFL, REV Homeobox-leucine zipper family protein / lipid-binding... 0.03 OrthoFinder output from all 47 species
Adi_g130173 HB-8, ATHB8, ATHB-8 transcriptional co-regulator *(ZPR) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25553 PHB-1D, ATHB-14,... transcriptional co-regulator *(ZPR) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09861 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14341 HB-8, ATHB8, ATHB-8 transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20866 PHB-1D, ATHB-14,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26987 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g34188 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07101 PHB-1D, ATHB-14,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27214.t2 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008557 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0121.g046826 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g22008 HB-8, ATHB8, ATHB-8 transcriptional co-regulator *(ZPR) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45098 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.17G020900.1 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.17G083000.1 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original... 0.04 OrthoFinder output from all 47 species
Ceric.18G068400.1 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g07114 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19909 PHB-1D, ATHB-14,... transcriptional co-regulator *(ZPR) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07882 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12681 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13390 PHB-1D, ATHB-14,... transcriptional co-regulator *(ZPR) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g30691 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_02083 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.04 OrthoFinder output from all 47 species
Gb_22761 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.04 OrthoFinder output from all 47 species
LOC_Os01g10320.1 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.05 OrthoFinder output from all 47 species
LOC_Os03g43930.1 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.04 OrthoFinder output from all 47 species
LOC_Os12g41860.1 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
Lfl_g26487 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429434g0010 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.02 OrthoFinder output from all 47 species
MA_10435903g0020 ICU4, ATHB15,... Homeobox-leucine zipper protein ATHB-15 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_112057g0010 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
MA_19520g0020 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.04 OrthoFinder output from all 47 species
Mp1g24140.1 HB-8, ATHB8, ATHB-8 transcription factor (HD-ZIP III) 0.04 OrthoFinder output from all 47 species
Pnu_g09911 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26446 PHB-1D, ATHB-14,... transcriptional co-regulator *(ZPR) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22245 PHB-1D, ATHB-14,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006550 PHB-1D, ATHB-14,... transcriptional co-regulator *(ZPR) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019961 PHB-1D, ATHB-14,... component *(uL11) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g08842 No alias transcriptional co-regulator *(ZPR) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g10819 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g12564 No alias HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39110 No alias HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g066500.4.1 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.07 OrthoFinder output from all 47 species
Solyc12g044410.2.1 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.04 OrthoFinder output from all 47 species
Zm00001e000073_P001 IFL1, IFL, REV,... transcription factor (HD-ZIP III) 0.06 OrthoFinder output from all 47 species
Zm00001e004553_P004 IFL1, IFL, REV,... transcription factor (HD-ZIP III) 0.06 OrthoFinder output from all 47 species
Zm00001e005034_P001 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.08 OrthoFinder output from all 47 species
Zm00001e012408_P002 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.1 OrthoFinder output from all 47 species
Zm00001e018118_P002 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.05 OrthoFinder output from all 47 species
Zm00001e025995_P002 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.02 OrthoFinder output from all 47 species
Zm00001e039093_P002 IFL1, IFL, REV,... transcription factor (HD-ZIP III) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 162 370
IPR013978 MEKHLA 696 838
IPR001356 Homeobox_dom 18 76
No external refs found!