GSVIVT01035521001

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.ADA1 component

Gene families : OG0001506 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001506_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01035521001

Target	Alias	Description	ECC score	Gene Family Method
AT2G24530	No alias	unknown protein; BEST Arabidopsis thaliana protein match...	0.03	OrthoFinder output from all 47 species
Aspi01Gene55613.t1	Aspi01Gene55613	component *(ADA1) of SAGA transcription co-activator...	0.03	OrthoFinder output from all 47 species
Ceric.24G023100.1	Ceric.24G023100	component *(ADA1) of SAGA transcription co-activator...	0.03	OrthoFinder output from all 47 species
Ehy_g19414	No alias	component *(ADA1) of SAGA transcription co-activator...	0.03	OrthoFinder output from all 47 species
LOC_Os04g56300.1	LOC_Os04g56300	component ADA1 of SAGA transcription co-activator complex	0.03	OrthoFinder output from all 47 species
MA_7243g0030	No alias	component ADA1 of SAGA transcription co-activator complex	0.03	OrthoFinder output from all 47 species
Solyc06g068610.3.1	Solyc06g068610	component ADA1 of SAGA transcription co-activator complex	0.04	OrthoFinder output from all 47 species
Zm00001e006681_P001	Zm00001e006681	component ADA1 of SAGA transcription co-activator complex	0.04	OrthoFinder output from all 47 species
Zm00001e041823_P001	Zm00001e041823	component ADA1 of SAGA transcription co-activator complex	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0031248	protein acetyltransferase complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0070461	SAGA-type complex	IEA	Interproscan
CC	GO:0140535	intracellular protein-containing complex	None	Extended
CC	GO:1902493	acetyltransferase complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0031683	G-protein beta/gamma-subunit complex binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR024738	Hfi1/Tada1	4	242

External Links

No external refs found!