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  5. GSVIVT01033293001

GSVIVT01033293001


Description : Extradiol ring-cleavage dioxygenase OS=Arabidopsis thaliana


Gene families : OG0002553 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002553_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033293001

Target Alias Description ECC score Gene Family Method Actions
Aop_g03406 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14577 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0225.g058904 No alias not classified & original description: CDS=475-1254 0.06 OrthoFinder output from all 47 species
Cba_g31161 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g76444 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.15G050400.1 Ceric.15G050400 not classified & original description: pacid=50639528... 0.05 OrthoFinder output from all 47 species
Ceric.26G067800.1 Ceric.26G067800 not classified & original description: pacid=50599373... 0.05 OrthoFinder output from all 47 species
Dac_g11764 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14768 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g11123 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g39072 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16753 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10429870g0020 No alias 4,5-DOPA dioxygenase extradiol OS=Beta vulgaris... 0.03 OrthoFinder output from all 47 species
Ore_g31680 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0158.g023806 No alias not classified & original description: CDS=14-994 0.03 OrthoFinder output from all 47 species
Solyc11g072550.2.1 Solyc11g072550 Extradiol ring-cleavage dioxygenase OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e028627_P001 Zm00001e028627 Extradiol ring-cleavage dioxygenase OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006725 cellular aromatic compound metabolic process IEA Interproscan
MF GO:0008198 ferrous iron binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004183 Xdiol_dOase_suB 3 258
No external refs found!