Aliases : PBA1
Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-1 component
Gene families : OG0003808 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003808_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01032253001 | |
Cluster | HCCA: Cluster_80 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00025p00199560 | PBA1,... | Protein degradation.26S proteasome.20S core... | 0.05 | OrthoFinder output from all 47 species | |
AT4G31300 | PBA1 | N-terminal nucleophile aminohydrolases (Ntn hydrolases)... | 0.11 | OrthoFinder output from all 47 species | |
Adi_g063247 | PBA1 | beta-type-1 component *(PBA) of 26S proteasome &... | 0.05 | OrthoFinder output from all 47 species | |
Aev_g02000 | PBA1 | beta-type-1 component *(PBA) of 26S proteasome &... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g00255 | PBA1 | beta-type-1 component *(PBA) of 26S proteasome &... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0680.g082009 | PBA1 | beta-type-1 component *(PBA) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g00458 | PBA1 | beta-type-1 component *(PBA) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.24G046300.1 | PBA1, Ceric.24G046300 | beta-type-1 component *(PBA) of 26S proteasome &... | 0.05 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001098.5 | PBA1 | Protein degradation.26S proteasome.20S core... | 0.05 | OrthoFinder output from all 47 species | |
Cre06.g279000 | PBA1 | Protein degradation.26S proteasome.20S core... | 0.07 | OrthoFinder output from all 47 species | |
Cre12.g531100 | PBA1 | Protein degradation.26S proteasome.20S core... | 0.12 | OrthoFinder output from all 47 species | |
Dac_g01306 | PBA1 | beta-type-1 component *(PBA) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g53060.1 | PBA1, LOC_Os02g53060 | component beta type-1 of 26S proteasome | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os06g04800.1 | PBA1, LOC_Os06g04800 | component beta type-1 of 26S proteasome | 0.05 | OrthoFinder output from all 47 species | |
Len_g14846 | PBA1 | beta-type-1 component *(PBA) of 26S proteasome &... | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g00828 | PBA1 | beta-type-1 component *(PBA) of 26S proteasome &... | 0.05 | OrthoFinder output from all 47 species | |
Mp6g09980.1 | PBA1 | component beta type-1 of 26S proteasome | 0.16 | OrthoFinder output from all 47 species | |
Nbi_g00361 | PBA1 | beta-type-1 component *(PBA) of 26S proteasome &... | 0.09 | OrthoFinder output from all 47 species | |
Ore_g05180 | PBA1 | beta-type-1 component *(PBA) of 26S proteasome &... | 0.06 | OrthoFinder output from all 47 species | |
Pir_g00835 | PBA1 | beta-type-1 component *(PBA) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g41753 | PBA1 | beta-type-1 component *(PBA) of 26S proteasome &... | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0010.g004858 | PBA1 | beta-type-1 component *(PBA) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
Smo227897 | PBA1 | Protein degradation.26S proteasome.20S core... | 0.04 | OrthoFinder output from all 47 species | |
Solyc07g016200.3.1 | PBA1, Solyc07g016200 | component beta type-1 of 26S proteasome | 0.05 | OrthoFinder output from all 47 species | |
Spa_g09819 | PBA1 | beta-type-1 component *(PBA) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g09820 | PBA1 | beta-type-1 component *(PBA) of 26S proteasome &... | 0.04 | OrthoFinder output from all 47 species | |
Tin_g26432 | PBA1 | beta-type-1 component *(PBA) of 26S proteasome &... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e029965_P002 | PBA1, Zm00001e029965 | component beta type-1 of 26S proteasome | 0.1 | OrthoFinder output from all 47 species | |
Zm00001e036550_P001 | PBA1, Zm00001e036550 | component beta type-1 of 26S proteasome | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004298 | threonine-type endopeptidase activity | IEA | Interproscan |
CC | GO:0005839 | proteasome core complex | IEA | Interproscan |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
MF | GO:0005261 | monoatomic cation channel activity | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
MF | GO:0009055 | electron transfer activity | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
MF | GO:0015252 | proton channel activity | IEP | HCCA |
MF | GO:0015267 | channel activity | IEP | HCCA |
BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
CC | GO:0045261 | proton-transporting ATP synthase complex, catalytic core F(1) | IEP | HCCA |
BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | HCCA |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001353 | Proteasome_sua/b | 10 | 190 |
No external refs found! |