GSVIVT01032253001 (PBA1)


Aliases : PBA1

Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-1 component


Gene families : OG0003808 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003808_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032253001
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00199560 PBA1,... Protein degradation.26S proteasome.20S core... 0.05 OrthoFinder output from all 47 species
AT4G31300 PBA1 N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.11 OrthoFinder output from all 47 species
Adi_g063247 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Aev_g02000 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Aop_g00255 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Azfi_s0680.g082009 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Cba_g00458 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Ceric.24G046300.1 PBA1, Ceric.24G046300 beta-type-1 component *(PBA) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001098.5 PBA1 Protein degradation.26S proteasome.20S core... 0.05 OrthoFinder output from all 47 species
Cre06.g279000 PBA1 Protein degradation.26S proteasome.20S core... 0.07 OrthoFinder output from all 47 species
Cre12.g531100 PBA1 Protein degradation.26S proteasome.20S core... 0.12 OrthoFinder output from all 47 species
Dac_g01306 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
LOC_Os02g53060.1 PBA1, LOC_Os02g53060 component beta type-1 of 26S proteasome 0.06 OrthoFinder output from all 47 species
LOC_Os06g04800.1 PBA1, LOC_Os06g04800 component beta type-1 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Len_g14846 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Lfl_g00828 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Mp6g09980.1 PBA1 component beta type-1 of 26S proteasome 0.16 OrthoFinder output from all 47 species
Nbi_g00361 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.09 OrthoFinder output from all 47 species
Ore_g05180 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Pir_g00835 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Ppi_g41753 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004858 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Smo227897 PBA1 Protein degradation.26S proteasome.20S core... 0.04 OrthoFinder output from all 47 species
Solyc07g016200.3.1 PBA1, Solyc07g016200 component beta type-1 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Spa_g09819 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Spa_g09820 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Tin_g26432 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Zm00001e029965_P002 PBA1, Zm00001e029965 component beta type-1 of 26S proteasome 0.1 OrthoFinder output from all 47 species
Zm00001e036550_P001 PBA1, Zm00001e036550 component beta type-1 of 26S proteasome 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 10 190
No external refs found!