GSVIVT01031903001


No description available


Gene families : OG0000236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031903001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00226120 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G13000 No alias Protein of unknown function, DUF547 0.04 OrthoFinder output from all 47 species
AT3G18900 No alias unknown protein; CONTAINS InterPro DOMAIN/s: Protein of... 0.04 OrthoFinder output from all 47 species
Adi_g008972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39947 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g10150 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11890 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene46206.t1 Aspi01Gene46206 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g22564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37118 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os09g28850.1 LOC_Os09g28850 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g55482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g59225 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp7g01740.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g14595 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g36591 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g11360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo407459 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc08g078520.4.1 Solyc08g078520 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g13793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000910_P003 Zm00001e000910 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e002322_P002 Zm00001e002322 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e030276_P002 Zm00001e030276 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e032746_P001 Zm00001e032746 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR006869 DUF547 330 465
IPR025757 MIP1_Leuzipper 27 106
No external refs found!