1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01030666001

GSVIVT01030666001 (MMD1)


Aliases : MMD1

Description : RNA biosynthesis.transcriptional activation.PHD finger transcription factor


Gene families : OG0003400 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003400_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030666001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00102300 MS1,... RNA biosynthesis.transcriptional activation.PHD finger... 0.03 OrthoFinder output from all 47 species
AMTR_s00138p00035380 MMD1,... RNA biosynthesis.transcriptional activation.PHD finger... 0.03 OrthoFinder output from all 47 species
LOC_Os09g27620.1 MS1, LOC_Os09g27620 MMD1/DUET meiotic recombination regulating protein. PHD... 0.06 OrthoFinder output from all 47 species
MA_115384g0010 MMD1 MMD1/DUET meiotic recombination regulating protein. PHD... 0.03 OrthoFinder output from all 47 species
Mp3g06700.1 MMD1 PHD finger transcription factor 0.04 OrthoFinder output from all 47 species
Ore_g40819 MMD1 transcriptional regulator *(MS1) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s1844.g028194 MMD1 PHD finger transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Sam_g48354 No alias PHD finger transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g008420.1.1 MS1, Solyc04g008420 MMD1/DUET meiotic recombination regulating protein. PHD... 0.08 OrthoFinder output from all 47 species
Solyc11g011560.3.1 MMD1, Solyc11g011560 MMD1/DUET meiotic recombination regulating protein. PHD... 0.03 OrthoFinder output from all 47 species
Spa_g50133 MMD1 transcriptional regulator *(MS1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e034314_P001 MS1, Zm00001e034314 MMD1/DUET meiotic recombination regulating protein. PHD... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0008272 sulfate transport IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 608 653
No external refs found!