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  5. GSVIVT01030121001

GSVIVT01030121001


Description : GBF-interacting protein 1 OS=Arabidopsis thaliana


Gene families : OG0000712 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000712_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030121001
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Adi_g008163 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g021462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g048479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g061004 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g074702 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g087204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g120900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g129391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g129392 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15111 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20545 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04489 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11714 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07087 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60611.t1 Aspi01Gene60611 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15326 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g26977 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G033400.1 Ceric.02G033400 not classified & original description: pacid=50584302... 0.05 OrthoFinder output from all 47 species
Ceric.27G004200.1 Ceric.27G004200 not classified & original description: pacid=50604818... 0.04 OrthoFinder output from all 47 species
Ceric.29G083800.1 Ceric.29G083800 not classified & original description: pacid=50624429... 0.04 OrthoFinder output from all 47 species
Dac_g21669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16552 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g18699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19941 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_00263 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_30926 No alias GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Lfl_g03459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_137710g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_768428g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g06750.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g39958 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18048 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g49653 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0181.g024848 No alias not classified & original description: CDS=93-2615 0.03 OrthoFinder output from all 47 species
Sam_g14569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo438753 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc02g071180.3.1 Solyc02g071180 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc03g005750.3.1 Solyc03g005750 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc05g018750.4.1 Solyc05g018750 GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Spa_g05376 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14041 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e020237_P001 Zm00001e020237 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR009719 GIP1_N 10 69
No external refs found!