GSVIVT01030046001 (AtWRKY20, WRKY20)

Aliases : AtWRKY20, WRKY20

Description : RNA biosynthesis.transcriptional activation.WRKY transcription factor

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01030046001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00058p00090300	WRKY4,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AT2G03340	WRKY3	WRKY DNA-binding protein 3	0.05	OrthoFinder output from all 47 species
Als_g42426	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene41969.t2	AtWRKY20,...	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene67398.t1	ATWRKY71,...	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g25504	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g06264	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Gb_31953	WRKY4	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Gb_32055	AtWRKY20, WRKY20	transcription factor (WRKY). transcription factor (WRKY33)	0.03	OrthoFinder output from all 47 species
LOC_Os02g08440.1	ATWRKY40,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os12g32250.1	WRKY3, LOC_Os12g32250	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Lfl_g08941	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
MA_120969g0010	WRKY4	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Pir_g03099	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005938	AtWRKY20, WRKY20	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014728	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: CDS=1-543	0.07	OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023066	AtWRKY20, WRKY20	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Sam_g10405	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g22459	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g26717	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g29317	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g40045	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc12g006170.2.1	AtWRKY20,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e035385_P002	AtWRKY20,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0016579	protein deubiquitination	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	67	123
IPR003657	WRKY_dom	242	299

External Links

No external refs found!

GSVIVT01030046001 (AtWRKY20, WRKY20)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation