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  5. GSVIVT01028852001

GSVIVT01028852001


Description : Multi-process regulation.circadian clock.evening element regulation.REVEILLE clock factor


Gene families : OG0000435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000435_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028852001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00237480 evm_27.TU.AmTr_v1... Multi-process regulation.circadian clock.evening element... 0.01 OrthoFinder output from all 47 species
Als_g15171 RVE1 circadian clock core oscillator protein *(LHY/CCA1) &... 0.02 OrthoFinder output from all 47 species
Aop_g05829 No alias circadian clock factor *(REVEILLE) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13615 RVE2, CIR1 transcription factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31228.t1 RVE2, CIR1,... transcription factor *(REVEILLE) & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g30981 No alias circadian clock factor *(REVEILLE) & original description: none 0.04 OrthoFinder output from all 47 species
MA_102199g0010 RVE2, CIR1 transcription factor (MYB-related) 0.05 OrthoFinder output from all 47 species
Msp_g26311 RVE2, CIR1 transcription factor *(REVEILLE) & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g18852 RVE2, CIR1 transcription factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 41 85
No external refs found!