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  5. GSVIVT01028373001

GSVIVT01028373001


Description : Cellular respiration.tricarboxylic acid cycle.succinyl-CoA ligase dimer.beta subunit


Gene families : OG0004314 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004314_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028373001

Target Alias Description ECC score Gene Family Method Actions
AT2G20420 No alias ATP citrate lyase (ACL) family protein 0.05 OrthoFinder output from all 47 species
Adi_g018768 No alias subunit beta of succinyl-CoA ligase heterodimer &... 0.03 OrthoFinder output from all 47 species
Azfi_s0073.g037105 No alias subunit beta of succinyl-CoA ligase heterodimer &... 0.03 OrthoFinder output from all 47 species
Ceric.13G077600.1 Ceric.13G077600 subunit beta of succinyl-CoA ligase heterodimer &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001376.28 No alias Cellular respiration.tricarboxylic acid... 0.01 OrthoFinder output from all 47 species
Cre17.g703700 No alias Cellular respiration.tricarboxylic acid... 0.01 OrthoFinder output from all 47 species
Gb_21325 No alias subunit beta of succinyl-CoA ligase heterodimer 0.07 OrthoFinder output from all 47 species
LOC_Os02g40830.1 LOC_Os02g40830 subunit beta of succinyl-CoA ligase heterodimer 0.04 OrthoFinder output from all 47 species
Mp1g04210.1 No alias subunit beta of succinyl-CoA ligase heterodimer 0.04 OrthoFinder output from all 47 species
Msp_g04849 No alias subunit beta of succinyl-CoA ligase heterodimer &... 0.02 OrthoFinder output from all 47 species
Nbi_g02039 No alias subunit beta of succinyl-CoA ligase heterodimer &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0130.g022033 No alias subunit beta of succinyl-CoA ligase heterodimer &... 0.02 OrthoFinder output from all 47 species
Smo419323 No alias Cellular respiration.tricarboxylic acid... 0.04 OrthoFinder output from all 47 species
Solyc06g083790.3.1 Solyc06g083790 subunit beta of succinyl-CoA ligase heterodimer 0.04 OrthoFinder output from all 47 species
Tin_g05127 No alias subunit beta of succinyl-CoA ligase heterodimer &... 0.03 OrthoFinder output from all 47 species
Zm00001e015140_P001 Zm00001e015140 subunit beta of succinyl-CoA ligase heterodimer 0.04 OrthoFinder output from all 47 species
Zm00001e023009_P001 Zm00001e023009 subunit beta of succinyl-CoA ligase heterodimer 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004019 adenylosuccinate synthase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005811 CoA_ligase 297 417
IPR013650 ATP-grasp_succ-CoA_synth-type 29 237
No external refs found!