GSVIVT01027418001 (GIF3)


Aliases : GIF3

Description : RNA biosynthesis.transcriptional activation.GRF-GIF transcriptional complex.GIF cofactor component


Gene families : OG0001681 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001681_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027418001

Target Alias Description ECC score Gene Family Method Actions
AT5G28640 GIF1, GIF, ATGIF1, AN3 SSXT family protein 0.04 OrthoFinder output from all 47 species
Adi_g074441 GIF3 cofactor component *(GIF) of GRF-GIF transcriptional... 0.04 OrthoFinder output from all 47 species
Als_g20353 GIF2 cofactor component *(GIF) of GRF-GIF transcriptional... 0.03 OrthoFinder output from all 47 species
Als_g24160 GIF3 cofactor component *(GIF) of GRF-GIF transcriptional... 0.03 OrthoFinder output from all 47 species
Aop_g01054 GIF1, GIF, ATGIF1, AN3 cofactor component *(GIF) of GRF-GIF transcriptional... 0.04 OrthoFinder output from all 47 species
Aspi01Gene03112.t1 GIF1, GIF,... cofactor component *(GIF) of GRF-GIF transcriptional... 0.03 OrthoFinder output from all 47 species
Aspi01Gene07772.t1 Aspi01Gene07772 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene35942.t1 GIF3, Aspi01Gene35942 cofactor component *(GIF) of GRF-GIF transcriptional... 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013241 GIF3 cofactor component *(GIF) of GRF-GIF transcriptional... 0.03 OrthoFinder output from all 47 species
Cba_g06271 GIF3 cofactor component *(GIF) of GRF-GIF transcriptional... 0.03 OrthoFinder output from all 47 species
Cba_g07380 GIF3 cofactor component *(GIF) of GRF-GIF transcriptional... 0.03 OrthoFinder output from all 47 species
Ceric.29G051000.1 GIF3, Ceric.29G051000 cofactor component *(GIF) of GRF-GIF transcriptional... 0.03 OrthoFinder output from all 47 species
LOC_Os11g40100.3 GIF3, LOC_Os11g40100 cofactor component GIF of GRF-GIF transcriptional complex 0.04 OrthoFinder output from all 47 species
Nbi_g08088 GIF1, GIF, ATGIF1, AN3 cofactor component *(GIF) of GRF-GIF transcriptional... 0.03 OrthoFinder output from all 47 species
Pir_g24825 GIF1, GIF, ATGIF1, AN3 cofactor component *(GIF) of GRF-GIF transcriptional... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006083 GIF3 cofactor component *(GIF) of GRF-GIF transcriptional... 0.03 OrthoFinder output from all 47 species
Solyc03g082480.4.1 GIF3, Solyc03g082480 cofactor component GIF of GRF-GIF transcriptional complex 0.04 OrthoFinder output from all 47 species
Solyc10g009280.4.1 GIF3, Solyc10g009280 cofactor component GIF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
Solyc11g006230.3.1 GIF1, GIF,... cofactor component GIF of GRF-GIF transcriptional complex 0.02 OrthoFinder output from all 47 species
Spa_g46790 GIF3 cofactor component *(GIF) of GRF-GIF transcriptional... 0.03 OrthoFinder output from all 47 species
Zm00001e005583_P001 GIF1, GIF,... cofactor component GIF of GRF-GIF transcriptional complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003713 transcription coactivator activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007726 SS18_N 18 73
No external refs found!