1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01027164001

GSVIVT01027164001


Description : Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.XPO2 export karyopherin


Gene families : OG0004860 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004860_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027164001
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Adi_g011583 No alias nucleocytoplasmic export karyopherin *(XPO2) & original... 0.03 OrthoFinder output from all 47 species
Aev_g14777 No alias nucleocytoplasmic export karyopherin *(XPO2) & original... 0.02 OrthoFinder output from all 47 species
Ceric.21G087100.1 Ceric.21G087100 nucleocytoplasmic export karyopherin *(XPO2) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021428.12 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Cre16.g685901 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Dac_g01028 No alias nucleocytoplasmic export karyopherin *(XPO2) & original... 0.03 OrthoFinder output from all 47 species
Len_g01903 No alias nucleocytoplasmic export karyopherin *(XPO2) & original... 0.04 OrthoFinder output from all 47 species
MA_10426006g0010 No alias XPO2 nucleocytoplasmic export karyopherin 0.03 OrthoFinder output from all 47 species
Sam_g28152 No alias nucleocytoplasmic export karyopherin *(XPO2) & original... 0.02 OrthoFinder output from all 47 species
Smo164894 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder output from all 47 species
Tin_g13643 No alias nucleocytoplasmic export karyopherin *(XPO2) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e012166_P001 Zm00001e012166 XPO2 nucleocytoplasmic export karyopherin 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR005043 XPO2_C 151 350
IPR013713 XPO2_central 1 150
No external refs found!