GSVIVT01024099001

Description : Putative disease resistance protein At1g50180 OS=Arabidopsis thaliana

Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01024099001
Cluster	HCCA: Cluster_73

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00245940	evm_27.TU.AmTr_v1...	Disease resistance protein RPP8 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00058p00097500	evm_27.TU.AmTr_v1...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
AMTR_s00088p00057720	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AMTR_s00090p00087950	RPP13,...	Disease resistance protein RPP13 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00090p00137350	RPP13,...	Disease resistance protein RPP13 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AT1G50180	No alias	NB-ARC domain-containing disease resistance protein	0.03	OrthoFinder output from all 47 species
AT1G58410	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.07	OrthoFinder output from all 47 species
AT1G58602	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.05	OrthoFinder output from all 47 species
AT3G46530	RPP13	NB-ARC domain-containing disease resistance protein	0.03	OrthoFinder output from all 47 species
AT3G50950	ZAR1	HOPZ-ACTIVATED RESISTANCE 1	0.05	OrthoFinder output from all 47 species
GSVIVT01012167001	RPM1, RPS3	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01012169001	RPM1, RPS3	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
GSVIVT01018564001	No alias	Putative disease resistance RPP13-like protein 3...	0.05	OrthoFinder output from all 47 species
GSVIVT01024101001	RPP13	Disease resistance protein RPP13 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01026740001	No alias	Putative disease resistance protein At1g50180...	0.04	OrthoFinder output from all 47 species
GSVIVT01026747001	No alias	Putative disease resistance protein At1g50180...	0.04	OrthoFinder output from all 47 species
GSVIVT01032830001	No alias	Probable disease resistance RPP8-like protein 2...	0.04	OrthoFinder output from all 47 species
Gb_29699	No alias	Disease resistance protein RPS5 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os04g02120.1	LOC_Os04g02120	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os11g11960.1	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os11g12000.1	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
LOC_Os12g17430.1	LOC_Os12g17430	no description available(sp\|p0do08\|pikm2_orysj : 108.0)	0.03	OrthoFinder output from all 47 species
Solyc04g009690.2.1	RPP13, Solyc04g009690	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	505	707
IPR002182	NB-ARC	180	257

External Links

No external refs found!

GSVIVT01024099001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation