1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01023951001

GSVIVT01023951001 (ATSLY1)


Aliases : ATSLY1

Description : SEC1 family transport protein SLY1 OS=Arabidopsis thaliana


Gene families : OG0004244 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004244_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01023951001

Target Alias Description ECC score Gene Family Method Actions
AT2G17980 ATSLY1 Sec1/munc18-like (SM) proteins superfamily 0.04 OrthoFinder output from all 47 species
Adi_g059663 ATSLY1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07437 ATSLY1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0021.g015708 ATSLY1 not classified & original description: CDS=1-2082 0.06 OrthoFinder output from all 47 species
Ceric.09G038700.1 ATSLY1, Ceric.09G038700 not classified & original description: pacid=50588187... 0.04 OrthoFinder output from all 47 species
Cre12.g521350 ATSLY1 SEC1 family transport protein SLY1 OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
Dcu_g03913 ATSLY1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Gb_02336 ATSLY1 SEC1 family transport protein SLY1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os03g42320.1 ATSLY1, LOC_Os03g42320 SEC1 family transport protein SLY1 OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species
Lfl_g01777 ATSLY1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g02060.1 ATSLY1 SEC1 family transport protein SLY1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Msp_g12960 ATSLY1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02164 ATSLY1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g11028 ATSLY1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g112150.3.1 ATSLY1, Solyc01g112150 SEC1 family transport protein SLY1 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Spa_g07440 ATSLY1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002799_P001 ATSLY1, Zm00001e002799 SEC1 family transport protein SLY1 OS=Oryza sativa... 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006904 vesicle docking involved in exocytosis IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0097354 prenylation IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
InterPro domains Description Start Stop
IPR001619 Sec1-like 307 535
IPR001619 Sec1-like 35 307
No external refs found!